DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qua and avil

DIOPT Version :9

Sequence 1:NP_001246066.1 Gene:qua / 35058 FlyBaseID:FBgn0003187 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_001035455.1 Gene:avil / 678618 ZFINID:ZDB-GENE-060421-6683 Length:811 Species:Danio rerio


Alignment Length:911 Identity:245/911 - (26%)
Similarity:406/911 - (44%) Gaps:146/911 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TFRKVAKHAITFAIWKIDEDRLEAVQRSHYGTFYDSCAYIIYAASLSGHYANHETITREQKPNVS 89
            |||.|...| ...||:|::..|..:....:|.|:|...|::.:...||     :||:.:      
Zfish     4 TFRAVTNSA-GVLIWRIEKMDLVLIPEKFHGQFFDGDCYLLLSTCKSG-----KTISYD------ 56

  Fly    90 LERYIHYWLG--KNVSEQNRSNVVHKIQELDSYLGNISSIYRETQNLESARFLSYFKKGYEFRFS 152
                ||||:|  .::.||..: .::.:| ||.:||:....:||.|..||:.|..|||:|..:   
Zfish    57 ----IHYWIGSASSIDEQGAA-AMYAVQ-LDEFLGSTPVQHREVQQHESSMFCGYFKQGIIY--- 112

  Fly   153 VRSGALISAPQR--------PRLFQLYARKWLRSIEVATIDWSHFNSDYVMVLQTDNLTYVWIGR 209
             :||.:.|....        .||..:..|:.:...|| .:.|..|::..|.:|........|.|.
Zfish   113 -KSGGVASGMNHVETNTYNIQRLLHVKGRRKVTGTEV-EVSWKSFDTGSVFLLDLGKTIIQWNGP 175

  Fly   210 SSSGIERRS----ALDWVQKHCSG-SPITIVDDGYEQAMSQEHKELWNTMLP-LKKRMVCQASQL 268
            .|:..||..    |.|...:...| :.|.:::...|.|...    |...||. |.:|.....|..
Zfish   176 ESNTQERLKGMMLAKDIRDRERGGRAEIGVIEGDAEAAAPL----LMQVMLSILGERPSTLPSGT 236

  Fly   269 VSEYADYNS-NKFRIYKCNQ-RGRLHLDQLDVGMPAKDDLSDAHGVYLLDNYGQSIWLWVGGQAP 331
            ..:..|... .|..:|..:. .|.:.:.::... |...||.:....|:||..|.||::|.|..|.
Zfish   237 PDDVTDREQMAKLTLYHVSDANGTMQITEIATS-PLTQDLLNHDDCYILDQGGVSIFVWKGKMAN 300

  Fly   332 QADALSAMGNGRAFVKKKKYPDNTLVVRVLEGHEPVEFKRLFANWLNVWQENTRG----H---KP 389
            :|:..:||.....|:|.|.||.:|.|..:.:|.|...||:||.||  ..::.|:|    |   |.
Zfish   301 KAERQAAMTRALEFIKLKNYPLSTKVESICDGGESALFKQLFKNW--TVKDQTQGLGRTHTVGKI 363

  Fly   390 VSTKFGKLDAHSLCERPKMAADTQLVDDGRGERVIYRVFGDQVQEVPISKTVVFTTNASFVVKYS 454
            ......|.||..:...|::||..::||||.||:.::|:...::.||..:....|.....:::.||
Zfish   364 ADVPQEKFDASRMHMMPEVAAQERMVDDGSGEKQVWRIENLELAEVSKATHGFFYGGDCYLILYS 428

  Fly   455 VQCATVVPADLASVGIKT-IIYQWNGSEASVESISRADKFA---KASFDGLKEPGMFVQLYEFDE 515
            .:..          |.|. |:|.|.|..||.:.::.....|   ...:.|  :| :.|.:....|
Zfish   429 YEVN----------GRKNYILYMWRGRHASQDEVTACAYHAVTVDQQYGG--QP-VQVSVTMGKE 480

  Fly   516 PPHFLQIFEGKLIIRRGQRT-------EMPYNGNSNALLDTFLLKVYGDASYNAKAVEETHL-SS 572
            |.||..||:||::|..|..:       |.|..          |.::.|....:.:|||...| :|
Zfish   481 PRHFTSIFKGKMVIYEGGTSRKGPVEPEPPVR----------LFQICGSHPSSTRAVEVPALAAS 535

  Fly   573 ISSKDCYVIKT-NHVWVWCGQSSTGDAREMAKAVGALMGENSLVL-EGKESKEFWQSVAMYFNQT 635
            ::|.|.:::|: :.|::|.|:.|:||.|.|||.:..:||.:..|: ||:|.:|||||:       
Zfish   536 LNSNDVFLLKSQSGVYLWYGKGSSGDERAMAKDLSVIMGRSEQVMAEGQEPEEFWQSL------- 593

  Fly   636 LVINGNGNSCSSSTSSSSGAGSMCNGSSNGGNISPTLSNNCYLNTSVPSKPRPPVQLFLVWWQQS 700
                                          |..:|..|:......::..:||    ||....:..
Zfish   594 ------------------------------GGRTPYASDRRLQQVTLEHQPR----LFECSNKTG 624

  Fly   701 SLRYEEILGFDQQDLSSDCTYILDTGSLTYVWLGSQAPNQERYTAI--AQSYVQNAPFGRRSATA 763
            .....|:..|.|.||..|...:|||....::|:|::|.:.||...:  ...|::..|..|...|.
Zfish   625 RFTATEVTQFTQDDLREDDVMLLDTWDQIFLWMGNEANDVERRECVPTCAEYLRTHPGSRDPDTP 689

  Fly   764 LAVVRQFQEPNVFKGFFESWQNDYGKNFHSYEKMRKDLGN-KVTSNCCFASEGSALILNNRQKDF 827
            :.:::|..||..|.|:|.:|.........:||:::::||: .:.|...:.|:...   ||...: 
Zfish   690 IVIIKQGFEPPTFTGWFTAWDPSKWSGGKTYEQLKQELGDVTLPSTIQYISDAPE---NNIISE- 750

  Fly   828 DGHKKYPLTVLI-QEMDMLPPDINPLKREVHLTHDDFVSVFNMSFYEFDELPKWKKMELKKQFKL 891
                 ||..:|: :..:.||.|::|.:||.||:..||.:||.:|...|..||:||:..:|||..|
Zfish   751 -----YPAALLVNKSTEDLPKDVDPAQREKHLSEADFQAVFGISKEAFSCLPQWKQARMKKQKGL 810

  Fly   892 F 892
            |
Zfish   811 F 811

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
quaNP_001246066.1 ADF_gelsolin 26..147 CDD:301701 37/122 (30%)
gelsolin_like 164..254 CDD:200436 21/102 (21%)
gelsolin_S3_like 276..375 CDD:200448 31/100 (31%)
GEL 424..526 CDD:214590 24/105 (23%)
ADF_gelsolin 551..625 CDD:301701 27/76 (36%)
gelsolin_like 689..780 CDD:200436 25/92 (27%)
VHP 857..892 CDD:128458 15/34 (44%)
avilNP_001035455.1 gelsolin_S1_like 5..116 CDD:200446 39/132 (30%)
gelsolin_S2_like 132..226 CDD:200445 23/98 (23%)
gelsolin_S3_like 250..344 CDD:200448 30/94 (32%)
gelsolin_S4_like 388..488 CDD:200449 28/112 (25%)
gelsolin_S5_like 509..598 CDD:200444 33/135 (24%)
gelsolin_S6_like 613..710 CDD:200447 28/100 (28%)
VHP 777..811 CDD:280388 14/33 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - O PTHR11977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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