DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qua and fliI

DIOPT Version :9

Sequence 1:NP_001246066.1 Gene:qua / 35058 FlyBaseID:FBgn0003187 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_525097.1 Gene:fliI / 33110 FlyBaseID:FBgn0000709 Length:1256 Species:Drosophila melanogaster


Alignment Length:929 Identity:188/929 - (20%)
Similarity:319/929 - (34%) Gaps:277/929 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLSPKETEIRPNTIPDLKVDATFRKVAKHAITFAIWKIDEDRLEAVQRSHYGTFYDSCAYIIYAA 68
            ||.||..: .....|.|.....|.|.........||:|:......::...:|.||:...||:...
  Fly   468 SLKPKRWD-ESLEKPQLDYSKFFEKDDGQLPGLTIWEIENFLPNKIEEVVHGKFYEGDCYIVLKT 531

  Fly    69 SLS--GHYANHETITREQKPNVSLERYIHYWLGKNVSEQNRS-NVVHKIQELDSYLGNISSIYRE 130
            ...  |                .|:..|.:|:|...:...|: ..:|.: .|.::||......||
  Fly   532 KFDDLG----------------LLDWEIFFWIGNEATLDKRACAAIHAV-NLRNFLGARCRTVRE 579

  Fly   131 TQNLESARFLSYFK------------KGYEFRFSVRSGALISAPQRPRLFQLYARKWLRSIE--- 180
            .|..||.:|||.|:            .|:   :::.....|:     ||:.::|......:|   
  Fly   580 EQGDESEQFLSLFETEVIYIEGGRTATGF---YTIEEMIHIT-----RLYLVHAYGATIHLEPVA 636

  Fly   181 --VATIDWSHFNSDYVMVLQTDNLTYVWIG-RSSSGIERRSAL--DWVQK-----HCSGSPITIV 235
              :.::|..|     ..||......|:|:| ||.:.:..::.|  :.:.|     .|.   |.:.
  Fly   637 PAITSLDPRH-----AFVLDLGTHIYIWMGERSKNTLNSKARLMAEKISKTERKNKCE---IQLE 693

  Fly   236 DDGYEQAMSQEHKELWNTMLPLKKRMVCQASQLVSEYA------------DYNSNKFRIYKCNQR 288
            ..|.|.|      |.|            |...:.||.|            ||...:.|:|:. |.
  Fly   694 RQGEESA------EFW------------QGLGMTSEEADAAEPPKEHVPEDYQPVQPRLYQV-QL 739

  Fly   289 GRLHLDQLDVGMPAK---DDLSDAHGVYLLDNYGQSIWLWVGGQAPQADALSAMGNGRAFVKKKK 350
            |..:|:...|.:|.:   ..|.::..||:||.| ..:::|.|.::.:....:|:...|.......
  Fly   740 GMGYLELPQVELPEQKLCHTLLNSKHVYILDCY-TDLFVWFGKKSTRLVRAAAVKLSRELFNMMD 803

  Fly   351 YPDNTLVVRVLEGHEPVEFKRLFANW---------------------LNVW--QENTRGHKPVST 392
            .||..||:||.||:|...|:..||.|                     |..|  |:.||      |
  Fly   804 RPDYALVMRVPEGNEMQIFRTKFAGWDEVMAVDFTRTAKSVAKTGANLTQWARQQETR------T 862

  Fly   393 KFGKLDAHSLCERPKMAADTQLVDDGRGERVIYRVF---GDQVQEVPISKTVVFTTNASFVVKYS 454
            ....|........| :|...||.::...:..:...|   ..:...:|..:...|.|...:|    
  Fly   863 DLAALFMPRQSAMP-LAEAEQLEEEWNYDLEMMEAFVLENKKFVRLPEEELGRFYTGECYV---- 922

  Fly   455 VQCATVVP---------------ADLASVG--------IKTIIYQWNGSEAS-----VESISRAD 491
            ..|...:|               ||::...        |:.::|.|.|..|.     ..:.:...
  Fly   923 FLCRYCIPIEEPENGSEDGANPAADVSKSSANNQPEDEIQCVVYFWQGRNAGNMGWLTFTFTLQK 987

  Fly   492 KFAKASFDGLKEPGMFVQLYEFDEPPHFLQIFEGKLIIRRGQRTEMPYNGNSNALLDTFLLKVYG 556
            || ||.|.   |....|::::..|...|:..|:.|.||..|:|.:..:.....:.::.|.|:..|
  Fly   988 KF-KAMFG---EELEVVRIFQQQENLKFMSHFKRKFIIHTGKRKDKAHTAKGKSPVEFFHLRSNG 1048

  Fly   557 DA------SYNAKAVEETHLSSISSKDCYVI----------KTNHVWVWCGQSSTGDAREMAKAV 605
            .|      ..|..||   ||:|..   ||::          ::..|:||.|..:..:..::.:.:
  Fly  1049 GALTTRLIQINPDAV---HLNSTF---CYILHVPFETEDDSQSGIVYVWIGSKACNEEAKLVQDI 1107

  Fly   606 GALMGEN-----SLVLEGKESKE-FWQSV---------AMYFNQTLVINGNGNSCSSSTSSSSGA 655
            ...|..:     .::.||.|.:. ||.::         |.|.|.|.:..     ||:.....:.|
  Fly  1108 AEQMFNSPWVSLQILNEGDEPENFFWVALGGRKPYDTDAEYMNYTRLFR-----CSNERGYYTVA 1167

  Fly   656 GSMCNGSSNGGNISPTLSNNCYLNTSVPSKPRPPVQLFLVWWQQSSLRYEEILGFDQQDLSSDCT 720
                                                             |:...|.|.||:.|..
  Fly  1168 -------------------------------------------------EKCADFCQDDLADDDI 1183

  Fly   721 YILDTGSLTYVWLGSQAPNQERYTAI--AQSYVQNAPFGRRSATALAVVRQFQEPNVFKGFFESW 783
            .|||.|...::|:|.:....|...|.  ||.|:|:              .:.::|...:..|.:.
  Fly  1184 MILDNGEHVFLWMGPRCSEVEVKLAYKSAQVYIQH--------------MRIKQPERPRKLFLTM 1234

  Fly   784 QND----YGKNFHSYEKMR 798
            :|.    :.|.||.:...:
  Fly  1235 KNKESRRFTKCFHGWSAFK 1253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
quaNP_001246066.1 ADF_gelsolin 26..147 CDD:301701 29/135 (21%)
gelsolin_like 164..254 CDD:200436 22/102 (22%)
gelsolin_S3_like 276..375 CDD:200448 28/101 (28%)
GEL 424..526 CDD:214590 24/132 (18%)
ADF_gelsolin 551..625 CDD:301701 19/95 (20%)
gelsolin_like 689..780 CDD:200436 19/92 (21%)
VHP 857..892 CDD:128458
fliINP_525097.1 leucine-rich repeat 7..30 CDD:275380
leucine-rich repeat 31..53 CDD:275380
LRR_8 53..112 CDD:290566
leucine-rich repeat 54..76 CDD:275380
LRR_RI 70..304 CDD:238064
leucine-rich repeat 77..101 CDD:275380
LRR_8 101..159 CDD:290566
leucine-rich repeat 102..124 CDD:275380
leucine-rich repeat 125..148 CDD:275380
leucine-rich repeat 149..171 CDD:275380
LRR_8 152..231 CDD:290566
leucine-rich repeat 172..195 CDD:275380
leucine-rich repeat 196..220 CDD:275380
leucine-rich repeat 221..243 CDD:275380
LRR_8 243..300 CDD:290566
leucine-rich repeat 244..266 CDD:275380
leucine-rich repeat 267..289 CDD:275380
leucine-rich repeat 290..314 CDD:275380
LRR_8 315..370 CDD:290566
leucine-rich repeat 315..335 CDD:275380
leucine-rich repeat 338..360 CDD:275378
gelsolin_S1_like 491..602 CDD:200446 28/127 (22%)
gelsolin_like 618..706 CDD:200436 23/118 (19%)
gelsolin_S3_like 729..828 CDD:200448 28/100 (28%)
gelsolin_like 920..1015 CDD:200436 19/102 (19%)
gelsolin_S5_like 1037..1141 CDD:200444 22/109 (20%)
gelsolin_S6_like 1151..1250 CDD:200447 28/166 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0443
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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