DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qua and scinla

DIOPT Version :9

Sequence 1:NP_001246066.1 Gene:qua / 35058 FlyBaseID:FBgn0003187 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_835232.2 Gene:scinla / 323285 ZFINID:ZDB-GENE-030131-2005 Length:720 Species:Danio rerio


Alignment Length:783 Identity:195/783 - (24%)
Similarity:327/783 - (41%) Gaps:130/783 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IWKIDEDRLEAVQRSHYGTFYDSCAYIIYAASLSGHYANHETITREQKPNVSLERYIHYWLGKNV 102
            ||:|::..|:.|.:..:|.|:...||::...|.:..|                  .:|.|||...
Zfish    18 IWRIEKMDLKLVPKQLHGNFFTGDAYVVLFTSPAPSY------------------NVHMWLGNEC 64

  Fly   103 SEQNRSNVVHKIQELDSYLGNISSIYRETQNLESARFLSYFKKGYEFR-FSVRSG---ALISAPQ 163
            |:...........:||.:||.....|||.||.||..||.|||.|.::: ..|.||   .:.:...
Zfish    65 SQDESGAAAIFAMQLDDHLGGAPVQYREVQNNESVTFLGYFKTGIKYKQGGVSSGFNHVVSNEMN 129

  Fly   164 RPRLFQLYARKWLRSIEVATIDWSHFNSDYVMVLQTDNLTYVWIGRSSSGIERRSALDWV----- 223
            ..|:..:..|:.:|:.|| .:.|:.||.....:|......|.|.|...:..||..|.:..     
Zfish   130 TKRVLHIKGRRAIRATEV-NMSWASFNHGDCFILDLGKDIYQWCGSKCNRFERLKASEVSIGIRD 193

  Fly   224 QKHCSGSPITIVDDGYEQAMSQEHKELWNTMLPLKKRMVCQASQLVSEYADYNSNKFRIYKCNQR 288
            .:....:.:.||:||.|..:..      ||:.|  |..:.:.|. ..|..|.|:.|        :
Zfish   194 NERNGRATLHIVEDGSEPDVFS------NTLGP--KPSIPEGSP-DDETTDRNNQK--------K 241

  Fly   289 GRLHL----------DQLDVGMPAKDDLSDAHGVYLLDN-YGQSIWLWVGGQAPQADALSAMGNG 342
            ..||:          .::....|.|.:|.:....|:||| ....|::|.|.:|...:..|||...
Zfish   242 ASLHMVSDAAGSMKTSEVKQNSPFKQELLNPSDCYILDNGLDSKIFVWKGPRANTEERKSAMKVA 306

  Fly   343 RAFVKKKKYPDNTLVVRVLEGHEPVEFKRLFANWLNVWQENTRGHKPVSTKFGKL--------DA 399
            ..|:|:|.||.||.:..:..|.|...||:.|:||.:..|....|.   :...|::        ||
Zfish   307 EQFIKEKNYPKNTQIQVMPGGGETTLFKQFFSNWKDKDQSTGPGQ---AYSIGRIARVSQVPFDA 368

  Fly   400 HSLCERPKMAADTQLVDDGRGERVIYRVFGDQVQEVPISKTVVFTTNASFVVKYSVQCATVVPAD 464
            .||.....|||...:||||.|:..::||.|:  ..||:..       :||...:...|..::...
Zfish   369 SSLHSNKVMAAQHGMVDDGSGKVQVWRVEGN--DRVPVDP-------SSFGQFFGGDCYLILYTY 424

  Fly   465 LASVGIKTIIYQWNGSEASVESISRADKFAKASFDGLKEPGMFVQLYEFDEPPHFLQIFEGK-LI 528
            |.....:.|||.|.|.:.:.:.::.:........|.:....:.|::.:..||.|.:.:|:|| :|
Zfish   425 LNGGREQHIIYTWQGLKCTQDELTASAFLTVKLDDSMGGAPVQVRVTQGQEPAHLMSLFKGKPMI 489

  Fly   529 IRRGQRTEMPYNGNSNALLDTFLLKVYGDASYNAKAVE-ETHLSSISSKDCYVIK-TNHVWVWCG 591
            |..|..:.   .|..:.:..|.|..:...::...:||| |...|.:::.|.:|:| ...:::|.|
Zfish   490 IHLGGTSR---KGGQSRVGTTRLFHIRQSSTRATRAVEVEPCASKLNTNDVFVLKFPEGMFLWKG 551

  Fly   592 QSSTGDAREMAKAVGALMGENSL-VLEGKESKEFWQSVAMYFNQTLVINGNGNSCSSSTSSSSGA 655
            ..::.:....||.|.:::|.::. :.||||...||                              
Zfish   552 VGASEEEIAAAKYVCSILGGSATEISEGKEPAAFW------------------------------ 586

  Fly   656 GSMCNGSSNGGNISPTLSNNCYLNTSVPSKPRPPVQLFLVWWQQSSLRYEEILG-FDQQDLSSDC 719
                  ||.||......|.|......:|       :||....:...|..||:.| ..|.||::|.
Zfish   587 ------SSLGGKKDYQTSKNLQKTVKLP-------RLFGCSNKTGRLIAEEVPGDLTQSDLATDD 638

  Fly   720 TYILDTGSLTYVWLGSQAPNQERY--TAIAQSYVQNAPFGRRSATALAVVRQFQEPNVFKGFFES 782
            ..:|||....::|:|:.|..:|:.  ..||:.||.:.| .:|....:..::|..||..|.|:|::
Zfish   639 VMLLDTWDQIFLWIGNDANVEEKIGSAKIAKDYVDSDP-SKRQGIPIITIKQGFEPPSFTGWFQA 702

  Fly   783 WQN 785
            |.:
Zfish   703 WDS 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
quaNP_001246066.1 ADF_gelsolin 26..147 CDD:301701 32/108 (30%)
gelsolin_like 164..254 CDD:200436 21/94 (22%)
gelsolin_S3_like 276..375 CDD:200448 30/109 (28%)
GEL 424..526 CDD:214590 20/101 (20%)
ADF_gelsolin 551..625 CDD:301701 19/76 (25%)
gelsolin_like 689..780 CDD:200436 28/93 (30%)
VHP 857..892 CDD:128458
scinlaNP_835232.2 gelsolin_S1_like 7..115 CDD:200446 33/114 (29%)
gelsolin_S2_like 131..212 CDD:200445 20/81 (25%)
gelsolin_S3_like 239..339 CDD:200448 29/107 (27%)
gelsolin_S4_like 383..483 CDD:200449 24/108 (22%)
gelsolin_S5_like 506..594 CDD:200444 26/123 (21%)
gelsolin_S6_like 608..704 CDD:200447 30/103 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - O PTHR11977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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