DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment qua and gsna

DIOPT Version :10

Sequence 1:NP_001246066.1 Gene:qua / 35058 FlyBaseID:FBgn0003187 Length:892 Species:Drosophila melanogaster
Sequence 2:XP_021324427.2 Gene:gsna / 321099 ZFINID:ZDB-GENE-030131-9653 Length:738 Species:Danio rerio


Alignment Length:787 Identity:202/787 - (25%)
Similarity:348/787 - (44%) Gaps:118/787 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IWKIDEDRLEAVQRSHYGTFYDSCAYIIYAASLSGHYANHETITREQKPNVSLERYIHYWLGKNV 102
            :|:|::..|.||..:.||.||...||::.           :||   ::.:.:|:..:|:|||...
Zfish    18 VWRIEKFDLVAVPENLYGGFYTGDAYLVL-----------KTI---KQTSGNLQYDLHFWLGDYC 68

  Fly   103 SEQNRSNVVHKIQELDSYLGNISSIYRETQNLESARFLSYFKKGYEF-RFSVRSG---ALISAPQ 163
            ::....:......::|.|||.....|||.|..||..||.|||||.:: :..|.||   .:.:...
Zfish    69 TQDESGSAAIFTVQMDDYLGGKPIQYREVQGHESKSFLGYFKKGLQYMQGGVASGFKHVVTNEVV 133

  Fly   164 RPRLFQLYARKWLRSIEVATIDWSHFNSDYVMVLQTDNLTYVWIGRSSSGIERRSALDWVQ---- 224
            ..|:.|:..|:.:|:.|| .:.|..||.....:|...|..|.|.|..|:..|:..|....:    
Zfish   134 MQRVLQVKGRRVVRATEV-PVSWDSFNQGDCFILDLGNEIYQWCGSKSNRFEKLKATQLAKGIRD 197

  Fly   225 -KHCSGSPITIVDDGYEQAMSQEHKELWNTMLPLKKRMVCQASQLVSEYADYNSNKF-RIYKCNQ 287
             :....:.:.:.|:|.|:....|       :|..|..:...||..|.  ||.::.|. ::||.:.
Zfish   198 NERSGRARVYVCDEGVEREKMLE-------VLGEKPDLPEGASDDVK--ADASNRKMAKLYKVSD 253

  Fly   288 -RGRLHLDQLDVGMPAKDDLSDAHGVYLLDNYGQ-SIWLWVGGQAPQADALSAMGNGRAFVKKKK 350
             .|.:.:..:....|......::...::||:... .|::|.|..|...:..:||.....|:||..
Zfish   254 ASGDMAIALVAAENPFTQSALESSDCFILDHGSDGKIFVWKGKDANMEERKAAMKAADEFIKKMG 318

  Fly   351 YPDNTLVVRVLEGHEPVEFKRLFANWLNVWQENTRGHKPVSTKFGKL-----DAHSLCERPKMAA 410
            ||.:|.|..:.|..|...||:.|.||.:|.|....|...||....|:     ||.:|.:.|.|||
Zfish   319 YPKHTQVQILPEMGETPLFKQFFKNWRDVDQTEGMGVAYVSNSIAKIEKVPFDASTLHDSPAMAA 383

  Fly   411 DTQLVDDGRGERVIYRVFGDQVQEVPISKTVV--FTTNASFVVKYSVQCATVVPADLASVGIK-T 472
            ...::|.|.||:.|:|:.|.  .:||:..:..  |....|:::.||.:..          |.: .
Zfish   384 QHGMIDSGNGEKQIWRIEGS--DKVPVDPSTYGQFYGGDSYIILYSYRHG----------GRQGH 436

  Fly   473 IIYQWNGSEASVESISRADKFAKASFDGLKEPGMF----------VQLYEFDEPPHFLQIFEGK- 526
            |||.|.|::::.:.|. |.....|..|.....|..          |::.:..||.|.:.:|.|: 
Zfish   437 IIYIWQGADSTQDEIG-ASAILGAQLDDELGGGPVQMAGAPLTTQVRVVQGKEPAHLMSLFGGQP 500

  Fly   527 LIIRRGQRTEMPYNGNSNALLDTFLLKVYGDASYNAKAVEETHLSS-ISSKDCYVIKTNHV-WVW 589
            :::.:|..:.   .|...|..:|.|.:|..:::...:|||...:|| ::|.|.:|:.|... ::|
Zfish   501 MVVHKGGTSR---EGGQTAPAETRLFQVRSNSAGCTRAVEIDAVSSNLNSNDAFVLVTPAASFIW 562

  Fly   590 CGQSSTGDAREMAKAVGALMGEN-SLVLEGKESKEFWQSVAMYFNQTLVINGNGNSCSSSTSSSS 653
            .||.::...:..|:.:..::|.: |.:.||.|...||.::             |...:..|||  
Zfish   563 VGQGASDIEKRGAQQLCGILGVSPSELSEGGEDGGFWDAL-------------GGKAAYRTSS-- 612

  Fly   654 GAGSMCNGSSNGGNISPTLSNNCYLNTSVPSKPRPPVQLFLVWWQQSSLRYEEILG-FDQQDLSS 717
                         .:...::.:             |.:||....:......||:.| ..|:||::
Zfish   613 -------------RLKDKMNAH-------------PPRLFACSNKTGRFIIEEVPGEMTQEDLAT 651

  Fly   718 DCTYILDTGSLTYVWLGSQAPNQERYTAI--AQSYVQNAPFGRRSATALAVVRQFQEPNVFKGFF 780
            |...||||....:||:|::|.::|:..|:  |..|:|..|..|...||:..::|..||..|.|:|
Zfish   652 DDVMILDTWDQVFVWIGNEAHDEEKMEAMTSAAQYIQTDPANRDPRTAIVKIKQGFEPPTFTGWF 716

  Fly   781 ESWQNDY 787
            ..|.:||
Zfish   717 LGWDHDY 723

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
quaNP_001246066.1 ADF_gelsolin 26..147 CDD:472830 34/108 (31%)
gelsolin_like 164..254 CDD:200436 21/94 (22%)
gelsolin_S3_like 276..375 CDD:200448 25/101 (25%)
GEL 424..526 CDD:214590 25/114 (22%)
ADF_gelsolin 551..625 CDD:472830 20/76 (26%)
gelsolin_like 689..780 CDD:200436 32/93 (34%)
VHP 857..892 CDD:128458
gsnaXP_021324427.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.