DRSC/TRiP Functional Genomics Resources

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Protein Alignment qua and Capg

DIOPT Version :9

Sequence 1:NP_001246066.1 Gene:qua / 35058 FlyBaseID:FBgn0003187 Length:892 Species:Drosophila melanogaster
Sequence 2:NP_001035999.1 Gene:Capg / 12332 MGIID:1098259 Length:349 Species:Mus musculus


Alignment Length:356 Identity:85/356 - (23%)
Similarity:156/356 - (43%) Gaps:47/356 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IWKIDEDRLEAVQRSHYGTFYDSCAYIIYAASLSGHYANHETITREQKPNVSLERYIHYWLGKNV 102
            ||::::.:...:.|..:|.|:...:|::.      |....|.            .::|.|:|:..
Mouse    23 IWRVEKLKPVPIARESHGIFFSGDSYLVL------HNGPEEA------------SHLHLWIGQQS 69

  Fly   103 SEQNRSNVVHKIQELDSYLGNISSIYRETQNLESARFLSYFKKGYEFR--------FSVRSGALI 159
            |...:.........|::.||.....:||.|..||..|:|||.:|.::|        ....|||..
Mouse    70 SRDEQGACAVLAVHLNTLLGERPVQHREVQGNESDLFMSYFPRGLKYREGGVESAFHKTTSGATP 134

  Fly   160 SAPQRPRLFQLYARKWLRSIEVATIDWSHFNSDYVMVLQTDNLTYVWIGRSSSGIERRSALDWV- 223
            :|.:  :|:|:..:|.:|:.|.| :.|..||:....:|......:.|.|..|:.:||..|.|.. 
Mouse   135 AAIR--KLYQVKGKKNIRATERA-LSWDSFNTGDCFILDLGQNIFAWCGGKSNILERNKARDLAL 196

  Fly   224 ----QKHCSGSPITIVDDGYEQAMSQEHKELWNTMLPLKKRMVCQASQLVSEYADY-NSNKFRIY 283
                .:....:.:.|:.||.|.|      |:...:.|  |..:.:.:......||. |:....:|
Mouse   197 AIRDSERQGKAQVEIITDGEEPA------EMIQVLGP--KPALKEGNPEEDITADQTNAQAAALY 253

  Fly   284 KCNQ-RGRLHLDQLDVGMPAKDDLSDAHGVYLLDN--YGQSIWLWVGGQAPQADALSAMGNGRAF 345
            |.:. .|:::|.::....|...:|......::|||  .|: |::|.|.:|.:.:..:|:.....|
Mouse   254 KVSDATGQMNLTKVADSSPFASELLIPDDCFVLDNGLCGK-IYIWKGRKANEKERQAALQVADGF 317

  Fly   346 VKKKKYPDNTLVVRVLEGHEPVEFKRLFANW 376
            :.:.:|..||.|..:.:|.|...||:.|.||
Mouse   318 ISRMRYSPNTQVEILPQGRESPIFKQFFKNW 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
quaNP_001246066.1 ADF_gelsolin 26..147 CDD:301701 24/108 (22%)
gelsolin_like 164..254 CDD:200436 23/94 (24%)
gelsolin_S3_like 276..375 CDD:200448 26/101 (26%)
GEL 424..526 CDD:214590
ADF_gelsolin 551..625 CDD:301701
gelsolin_like 689..780 CDD:200436
VHP 857..892 CDD:128458
CapgNP_001035999.1 gelsolin_S1_like 17..120 CDD:200446 26/114 (23%)
gelsolin_S2_like 139..226 CDD:200445 23/93 (25%)
gelsolin_S3_like 247..347 CDD:200448 25/100 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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