DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCS2beta and GTB1

DIOPT Version :9

Sequence 1:NP_001246063.1 Gene:GCS2beta / 35056 FlyBaseID:FBgn0032643 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_010507.3 Gene:GTB1 / 851807 SGDID:S000002629 Length:702 Species:Saccharomyces cerevisiae


Alignment Length:727 Identity:168/727 - (23%)
Similarity:270/727 - (37%) Gaps:229/727 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VLLIPLLLALVATN--VGSASEVPRPL-GVPLAKASLYQPRAGE-NSWTCLDGSR-TIPFSHIND 68
            |.:..|.|.|:..:  |.|..:..|.: |||..|..||.....: ..|.||:... .:..|.|||
Yeast     2 VSMFSLFLLLIEQSPLVASLQQSQRHIVGVPWEKQHLYDSNEPDLTKWHCLNHEDIVLDISQIND 66

  Fly    69 DYCDCADGSDEPGTAACPQG--------------QFHCVNKGHQPVNIPSSQVQDGICDCCDGSD 119
            ..|||.|||||||:|||.:.              .|:|.|||..|..|..|:|.||||||||.||
Yeast    67 GVCDCPDGSDEPGSAACVEDIFKSVAEGGGKVNKYFYCDNKGFIPRYIRKSEVADGICDCCDCSD 131

  Fly   120 E----SETVGCPNTCLELGAAAAVQRRNAAELHKRGAE----------RRQEMITRGKQMRAERE 170
            |    .|.....:.|.:|.....:........::.|.|          .::|.||||..:..::|
Yeast   132 ELLSGYELFDAGSNCSQLKNEFDIMASKELSSYREGKEALEELERKYGTKEEAITRGNCLEEDKE 196

  Fly   171 ARRLE-------LDQRRKEQELLRAEK-------------EQLKQT------------------- 196
            ....|       |.:.|.:.|.||.|.             |||..|                   
Yeast   197 KASAEIKVLSNRLSENRAKLEQLRGEYFNQLSHDPILYQFEQLNSTRLGSDILTSFTMVSRVSKG 261

  Fly   197 --------AEALEA-----------EAIEIFKEQQR-----EVDADT----AQA--------ERE 225
                    ::..||           :.|:.|::.:|     :::||:    .||        |..
Yeast   262 YQDIFKILSDLSEAYTPSLNDKVVNDNIKKFRKVRRRAEKAKINADSKIDDEQADNLYLYFTEEV 326

  Fly   226 PQQMRQEATLTFVRYDTNKDGFVEVTELMVDMNLDRDRNGVVTVEEAKYFLD---ERERVDL-DA 286
            ||...:..:...:||...|..||:.   :|:..::...:.:..:.|.:..:|   :...|:. ||
Yeast   327 PQIFLKRESENTLRYVIGKSNFVQA---LVEGKINYTNDILEYIREFRLIMDDISQNYNVNFQDA 388

  Fly   287 FVTLAWPRIKS----LQMLAEGLFQPPQPEE--VAQQPEVTTESIQPTPPKLSEEQAELAGDDDI 345
            .|..|....|:    ...|||  .:|..|.|  :....|||:        .::|...::...|.:
Yeast   389 GVKSAVDSYKNYLGEYGELAE--LEPAHPSESLLRSLSEVTS--------FVNENAPKVLPPDAV 443

  Fly   346 EADEEGEEDQYDDEEPDVGVGEASPDAEEATPPNYDPETQRLIQQAN--EARNALEEVERSLREI 408
            |::::...|.         :|         |..:...:.:.::.:.|  .:|..|..:|:..|..
Yeast   444 ESEQDTNSDH---------IG---------TSGDLRNKLKEILSKLNIFSSRKDLVSLEKRFRSC 490

  Fly   409 QQEV-----------------NEIDDQ--NNKGYGLTEEWAVHDGQCYNFED--REYVYTLCPFD 452
            :.:|                 :|.:|:  |:....|||...:...|.|..:|  ..||||:| |.
Yeast   491 ESQVSLLENELKQKMDYKKLLDETEDEGTNSTAGNLTELLELMGSQSYCLDDILDNYVYTIC-FQ 554

  Fly   453 RA-------SQKSRSGGPETTLGRWDKWSG-----EPKQYSQQ---------------------- 483
            |.       ..:.:..|.:..:||: |.||     ..::|::.                      
Yeast   555 RPMTEGVIYQAEDKVDGKKVLIGRF-KTSGFNVDLNMEKYAEHLKATYDEKSDLISNLAAIQDDD 618

  Fly   484 --------------------KYTNGAACWNGPNRSAIINISCALEPKITAVSEPNRCEYYFEFET 528
                                :|.||..|||||.|||.:.:.|:.:.||.:|.|..:|.|.|:...
Yeast   619 GNMQHYVFGNLNELNNGLVLEYENGDQCWNGPRRSATVFVRCSDKFKIRSVHEATKCNYIFDVVG 683

  Fly   529 PAACDSEAFQSE 540
            |..| ::.|:.|
Yeast   684 PLGC-NKTFEYE 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS2betaNP_001246063.1 PRKCSH-like 26..193 CDD:193472 66/217 (30%)
LDLa 85..120 CDD:238060 19/48 (40%)
PRKCSH 398..547 CDD:297835 50/218 (23%)
GTB1NP_010507.3 PRKCSH-like 28..187 CDD:372423 53/158 (34%)
PRK05771 127..>300 CDD:235600 32/172 (19%)
PRKCSH <635..695 CDD:414904 23/61 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343629
Domainoid 1 1.000 84 1.000 Domainoid score I1912
eggNOG 1 0.900 - - E1_KOG2397
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 145 1.000 Inparanoid score I1154
Isobase 1 0.950 - 0.859108 Normalized mean entropy S3335
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003054
OrthoInspector 1 1.000 - - oto99737
orthoMCL 1 0.900 - - OOG6_102618
Panther 1 1.100 - - LDO PTHR12630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R500
SonicParanoid 1 1.000 - - X3410
TreeFam 1 0.960 - -
1312.730

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