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Protein Alignment GCS2beta and GNPTG
DIOPT Version :9
Sequence 1: | NP_001246063.1 |
Gene: | GCS2beta / 35056 |
FlyBaseID: | FBgn0032643 |
Length: | 548 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_016879271.1 |
Gene: | GNPTG / 84572 |
HGNCID: | 23026 |
Length: | 321 |
Species: | Homo sapiens |
Alignment Length: | 143 |
Identity: | 39/143 - (27%) |
Similarity: | 60/143 - (41%) |
Gaps: | 30/143 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 431 VH----DGQCYNFEDREYVYTLCPFDRASQKSR-------SGGPETTLGRWDKWSGEPKQYSQQK 484
|| .|:|::..:..|.|..|||...:|..: || .||.|.:|......::...
Human 78 VHLFRLSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSG----ILGIWHEWEIANNTFTGMW 138
Fly 485 YTNGAACWNGPNRSAIINISCALEPKITAVSEPNRCEYYFEFETPAACD----------SEAFQS 539
..:|.|| ...:|.:.:.::|....::..||||:.|.|...||||..|. .||.|.
Human 139 MRDGDAC-RSRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTLPEALQR 202
Fly 540 E----SENLHDEL 548
: .::|.|||
Human 203 QWDQVEQDLADEL 215
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GCS2beta | NP_001246063.1 |
PRKCSH-like |
26..193 |
CDD:193472 |
|
LDLa |
85..120 |
CDD:238060 |
|
PRKCSH |
398..547 |
CDD:297835 |
36/140 (26%) |
GNPTG | XP_016879271.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2397 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D632472at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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