DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCS2beta and SPCC825.02

DIOPT Version :9

Sequence 1:NP_001246063.1 Gene:GCS2beta / 35056 FlyBaseID:FBgn0032643 Length:548 Species:Drosophila melanogaster
Sequence 2:NP_588052.1 Gene:SPCC825.02 / 2538725 PomBaseID:SPCC825.02 Length:506 Species:Schizosaccharomyces pombe


Alignment Length:567 Identity:160/567 - (28%)
Similarity:268/567 - (47%) Gaps:103/567 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LQLSQ--VLLIPLLLALVATNVGSASEVPRPLGVPLAKASLYQPRAGENSWTCLDGSRTIPFSHI 66
            ::.||  .|..|||::.:.| |.:|:::   .||...|:.||:|.| :.:|.||...:.|.|:.:
pombe     1 MKFSQWYTLTAPLLISSLYT-VNAANDL---RGVASDKSDLYKPDA-KGNWKCLGSDKLISFNQV 60

  Fly    67 NDDYCDCADGSDEPGTAACPQGQFHCVNKGHQPVNIPSSQVQDGICDCCDGSDESETVGCPNTCL 131
            |||||||.||||||||:||..|:|.|.|.|:....|||::|.|.:|||||||||| .:.||||| 
pombe    61 NDDYCDCPDGSDEPGTSACHNGKFFCKNTGYISSYIPSNRVDDTVCDCCDGSDES-LIKCPNTC- 123

  Fly   132 ELGAAAAVQRRNAAELHKRGAERRQEMITRGKQMRAEREARRLELDQRRKEQELLRAEKEQLKQT 196
                 |...|...|.|     |....::..|.::|     .:..|:..:|..|:    |.:.|:.
pombe   124 -----AQKAREYLATL-----EEHNRLVKNGLKIR-----EQWALESAKKTDEV----KARYKEI 169

  Fly   197 AEALEAEAIEIFKEQQREVDADTAQAEREPQQMRQ------EATLTFVRYDTNKDGFVEVTELMV 255
            :::|.|            |.|:..|...:.::|::      ||.|.....|..    |.:..|:.
pombe   170 SDSLVA------------VSAEKTQLSEKVEKMKRSTDLGAEAVLPLDFQDLR----VALLSLVD 218

  Fly   256 DMNLDRDRNGVVTVEEAKYFLDERERVDLDAFVTLAWPRIKSLQMLAEGL--FQPPQPEEVAQQP 318
            :.|..::|..::|     ..|||         :||.:...|..:.:.|.:  |:..:.:|:.:  
pombe   219 ERNEMQERLDILT-----NLLDE---------LTLLYETDKFDETMKEAILSFEDLKEQEIRR-- 267

  Fly   319 EVTTESIQPTPPKLSEEQAELAG-DDDIEADEEGEEDQ-------YDDEEPDVGVGEASPDAEEA 375
            :|:::.:.......:...:.|.| .:||......::.:       ::.:...:..|..||.|  :
pombe   268 KVSSDDVHNYLESCNNHLSMLTGPSEDITFSSLIKDIKKILNSLVWNIKLSLINFGILSPSA--S 330

  Fly   376 TPPNYDPETQRLIQQANEARNALEEVERSL-REIQQEVNEIDDQNNKGYGLTEEWAVHDGQCYNF 439
            :.|..|.|:.|..:.|....:|.||.|:|| :|..:.::|:  :.:.|:.|   :....|.....
pombe   331 STPLTDSESYRRFEAAQRDLDAAEENEKSLEKEHTKLMHEL--EYHHGWDL---YRAIKGMETKR 390

  Fly   440 EDREYVYTLCPFDRASQKSRSGGPETTLGRWDKWSGEPKQYSQQKYTNGAACWNGPNRSAIINIS 504
            |...|.|.:..::...|.|      ..||.:....|     :..||.||.:|||||:||||:.:.
pombe   391 EIGGYTYKVVFYENVFQDS------ILLGNFASQEG-----NVLKYENGQSCWNGPHRSAIVTVE 444

  Fly   505 CALEPKITAVSEPNRCEYYFEFETPAACDSEAFQ--------SESEN 543
            |.:|.:|.:|.|..:|||..:.::||||..:..:        |.:||
pombe   445 CGVENEIVSVLEAQKCEYLIKMKSPAACSPDQLKQSLLNTQNSANEN 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS2betaNP_001246063.1 PRKCSH-like 26..193 CDD:193472 66/166 (40%)
LDLa 85..120 CDD:238060 18/34 (53%)
PRKCSH 398..547 CDD:297835 46/155 (30%)
SPCC825.02NP_588052.1 PRKCSH-like 9..180 CDD:193472 77/208 (37%)
PRKCSH_1 346..506 CDD:205196 48/162 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 126 1.000 Domainoid score I1384
eggNOG 1 0.900 - - E1_KOG2397
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I1133
OMA 1 1.010 - - QHG54562
OrthoFinder 1 1.000 - - FOG0003054
OrthoInspector 1 1.000 - - oto101396
orthoMCL 1 0.900 - - OOG6_102618
Panther 1 1.100 - - LDO PTHR12630
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R500
SonicParanoid 1 1.000 - - X3410
TreeFam 1 0.960 - -
1312.860

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