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Protein Alignment GCS2beta and Gnptg
DIOPT Version :9
Sequence 1: | NP_001246063.1 |
Gene: | GCS2beta / 35056 |
FlyBaseID: | FBgn0032643 |
Length: | 548 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001333666.1 |
Gene: | Gnptg / 214505 |
MGIID: | 2147006 |
Length: | 314 |
Species: | Mus musculus |
Alignment Length: | 142 |
Identity: | 38/142 - (26%) |
Similarity: | 59/142 - (41%) |
Gaps: | 31/142 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 434 GQCYNFEDREYVYTLCPFDRASQKSR-------SGGPETTLGRWDKWSGEPKQYSQQKYTNGAAC 491
|:|::..:..|.|..|||...:|..: || .||.|.:|......:.....|:|.:|
Mouse 69 GKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSG----ILGIWHEWEIINNTFKGMWMTDGDSC 129
Fly 492 WNGPNR------SAIINISCALEPKITAVSEPNRCEYYFEFETPAACD----------SEAFQSE 540
.:...: |:.:.::|....::..||||:.|.|...||||..|. |||.|..
Mouse 130 HSRSRQSKPLRLSSQVELTCGKINRLAHVSEPSTCVYALTFETPLVCHPHSLLVYPTLSEALQQR 194
Fly 541 ----SENLHDEL 548
.::|.|||
Mouse 195 WDQVEQDLADEL 206
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GCS2beta | NP_001246063.1 |
PRKCSH-like |
26..193 |
CDD:193472 |
|
LDLa |
85..120 |
CDD:238060 |
|
PRKCSH |
398..547 |
CDD:297835 |
35/139 (25%) |
Gnptg | NP_001333666.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG2397 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D632472at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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