DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgt and TOM70

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_014278.3 Gene:TOM70 / 855602 SGDID:S000005065 Length:617 Species:Saccharomyces cerevisiae


Alignment Length:256 Identity:52/256 - (20%)
Similarity:97/256 - (37%) Gaps:73/256 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 GAAAAAVPNNIDMFELF---------QSLYTERNPESLALAESIKNEGNRLMKENKYNEALLQYN 140
            ||..:..|:|..::.:.         ::.:|....:..|||  :|::||:..:..||::|:..||
Yeast    61 GAKKSTAPSNPPIYPVSSNGEPDFSNKANFTAEEKDKYALA--LKDKGNQFFRNKKYDDAIKYYN 123

  Fly   141 RAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGNFEKAEQ 205
            .|:.. .::|:||.|.:|.::.:|:.::.|.....||....:|||...|...|...:|.|     
Yeast   124 WALEL-KEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKF----- 182

  Fly   206 AYAKAIELEPDNEVYKSNLEAARNARNQPPQTGRLREDLINMLSQPMVRNLFNNAEIDVEQLLSM 270
                                                .|.:..||...:...||:|.|  |.:|..
Yeast   183 ------------------------------------ADAMFDLSVLSLNGDFNDASI--EPMLER 209

  Fly   271 LQNPMIMNTIRQQFGG-GNAPTLPNDMVQMIYNMTSQLTGFPNSNANPGNEQQPGNQPPPS 330
            ..|...|:.::::||. ..|...|.::                 :..|..|::...:..||
Yeast   210 NLNKQAMSKLKEKFGDIDTATATPTEL-----------------STQPAKERKDKQENLPS 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154
TPR_11 116..177 CDD:290150 17/60 (28%)
TPR_2 116..149 CDD:285020 10/32 (31%)
TPR repeat 116..144 CDD:276809 10/27 (37%)
TPR_17 139..170 CDD:290167 9/30 (30%)
TPR repeat 149..179 CDD:276809 9/29 (31%)
TPR_16 156..218 CDD:290168 12/61 (20%)
TPR_1 184..217 CDD:278916 6/32 (19%)
TPR repeat 184..212 CDD:276809 6/27 (22%)
TOM70NP_014278.3 3a0801s09 1..614 CDD:273380 52/256 (20%)
TPR repeat 99..127 CDD:276809 12/29 (41%)
TPR repeat 131..161 CDD:276809 9/29 (31%)
TPR repeat 166..189 CDD:276809 7/63 (11%)
TPR repeat 330..358 CDD:276809
TPR repeat 363..391 CDD:276809
TPR repeat 396..426 CDD:276809
TPR repeat 431..459 CDD:276809
TPR repeat 465..493 CDD:276809
TPR repeat 498..537 CDD:276809
TPR repeat 542..567 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345397
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.