DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and Hop2

DIOPT Version :10

Sequence 1:NP_609842.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_176461.1 Gene:Hop2 / 842572 AraportID:AT1G62740 Length:571 Species:Arabidopsis thaliana


Alignment Length:328 Identity:83/328 - (25%)
Similarity:135/328 - (41%) Gaps:72/328 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ESIEVAIQCLQAAFDLGD-DVE------AAPAAAGE--------EQATTQSSSTASAPDDDAVA- 78
            :..|.|||....|.::.| |:.      |.....|:        ::|..:.....|  |...|| 
plant   257 KDFETAIQHYSTAMEIDDEDISYITNRAAVHLEMGKYDECIKDCDKAVERGRELRS--DYKMVAK 319

  Fly    79 ----SGSAGIGAAAAAVPNNIDMFELFQSLYTE-RNPESLAL---AESIKNE------------- 122
                .|:| :|..|....:...:.:.:|...|| ||||:|..   ||..|.|             
plant   320 ALTRKGTA-LGKMAKVSKDYEPVIQTYQKALTEHRNPETLKRLNEAERAKKELEQQEYYDPNIGD 383

  Fly   123 -----GNRLMKENKYNEALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNN 182
                 ||...||.||.:|:..|..||..:||:|..|.||||.:.:||.....:.|.:..:..:..
plant   384 EEREKGNDFFKEQKYPDAVRHYTEAIKRNPKDPRAYSNRAACYTKLGAMPEGLKDAEKCIELDPT 448

  Fly   183 YSKAYCRLGVAYSNMGNFEKAEQAYAKAIELEPDNEVYKSNLEAARNARNQPPQTGR-------L 240
            :.|.|.|.|.....|..::.|.:.|.|.:|.:|:|:   ..|:..:....|..:..|       |
plant   449 FLKGYSRKGAVQFFMKEYDNAMETYQKGLEHDPNNQ---ELLDGVKRCVQQINKANRGDLTPEEL 510

  Fly   241 RE---------DLINMLSQPMVRNLFNNAEIDVEQLLSMLQNPMIMNTIRQQFGGGNAPTLPNDM 296
            :|         ::.|:|:.|::|.:.::.:.:.......:|||||||.|::....|        :
plant   511 KERQAKGMQDPEIQNILTDPVMRQVLSDLQENPAAAQKHMQNPMIMNKIQKLISSG--------I 567

  Fly   297 VQM 299
            |||
plant   568 VQM 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_609842.1 SGTA_dimer 7..>48 CDD:465168 6/18 (33%)
TPR 116..>233 CDD:440225 37/134 (28%)
TPR repeat 116..144 CDD:276809 13/45 (29%)
TPR repeat 149..179 CDD:276809 9/29 (31%)
TPR repeat 184..212 CDD:276809 8/27 (30%)
Hop2NP_176461.1 PLN03088 1..>102 CDD:215568
TPR repeat 2..30 CDD:276809
TPR repeat 35..65 CDD:276809
TPR repeat 70..98 CDD:276809
STI1 134..188 CDD:436075
TPR repeat 243..271 CDD:276809 5/13 (38%)
TPR 247..276 CDD:197478 6/18 (33%)
TPR 271..548 CDD:440225 66/282 (23%)
TPR repeat 276..306 CDD:276809 4/29 (14%)
TPR repeat 318..349 CDD:276809 6/31 (19%)
TPR repeat 386..410 CDD:276809 9/23 (39%)
TPR repeat 415..445 CDD:276809 9/29 (31%)
TPR repeat 450..478 CDD:276809 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.

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