DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and TPR8

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001031594.1 Gene:TPR8 / 826386 AraportID:AT4G08320 Length:427 Species:Arabidopsis thaliana


Alignment Length:381 Identity:99/381 - (25%)
Similarity:152/381 - (39%) Gaps:106/381 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QSFVRSFIDYLKKQGDVMSPDQTESIEVAIQCLQAAFDLG-------DDVEAAPAAAGEEQATTQ 64
            :..||||:::|.........|: |.:|||.:||:.||.|.       ||....|.:......:..
plant    12 RKIVRSFLNFLDSVEVAPGVDE-EGLEVARECLREAFKLNSDSSRDDDDDSFKPISLVNLFTSLD 75

  Fly    65 SSSTASAPDDDAVASGSAGIGAAAAAVPNNIDMF-----------ELFQSLY------------- 105
            ::.|...|....||:.:....::.:.|  ::|..           |||..|:             
plant    76 NNETIPPPPPPPVAATTQDPSSSGSHV--SVDTCKEPSFTGTSRDELFGQLFGALEKVRYFRNTP 138

  Fly   106 -TERNPESL-------------------------ALAESIKNEGNRLMKENKYNEALLQYNRAIA 144
             .:.:|..|                         :|||::|.:||:.|:.|.|.||:..|:.|||
plant   139 DGDDDPAQLEKATRIFHDCVNEMEKSGCQTFDVNSLAETLKCQGNKAMQSNLYLEAVELYSFAIA 203

  Fly   145 FDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGNFEKA-EQAYA 208
            ...||.:||||||||:.::.....|:.||..::..:.||||||.|||:||...|.:.:| |:.:.
plant   204 LTDKNAVFYCNRAAAYTQINMCSEAIKDCLKSIEIDPNYSKAYSRLGLAYYAQGKYAEAIEKGFK 268

  Fly   209 KAIELEPDNEVYKSNLEAARNARNQPPQTGRLREDLINMLSQPMVRNLFNNAEIDVEQLLSMLQN 273
            ||:.|:|.||..|.|:..|.....:..|..|..:                             ||
plant   269 KALLLDPHNESVKENIRVAEQKIREEQQRQRRSQ-----------------------------QN 304

  Fly   274 PMIMNTIRQQFGGG-------NAPTLPNDMVQMIYNMTSQLTGFPNSNANPGNEQQ 322
            .....|...:.|||       :.|..| |::.|..||.        .|..|||..:
plant   305 TSTFYTQEPEMGGGQGIPSQFSMPVNP-DLMSMFMNMA--------GNTFPGNHSR 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154 15/45 (33%)
TPR_11 116..177 CDD:290150 27/60 (45%)
TPR_2 116..149 CDD:285020 14/32 (44%)
TPR repeat 116..144 CDD:276809 12/27 (44%)
TPR_17 139..170 CDD:290167 14/30 (47%)
TPR repeat 149..179 CDD:276809 12/29 (41%)
TPR_16 156..218 CDD:290168 25/62 (40%)
TPR_1 184..217 CDD:278916 16/33 (48%)
TPR repeat 184..212 CDD:276809 14/28 (50%)
TPR8NP_001031594.1 SGTA_dimer 13..73 CDD:293154 18/60 (30%)
TPR_11 175..240 CDD:290150 27/64 (42%)
TPR repeat 175..203 CDD:276809 12/27 (44%)
TPR_11 208..275 CDD:290150 29/66 (44%)
TPR repeat 208..238 CDD:276809 12/29 (41%)
TPR 209..242 CDD:197478 11/32 (34%)
TPR_1 243..277 CDD:278916 16/33 (48%)
TPR repeat 243..271 CDD:276809 13/27 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0553
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 102 1.000 Inparanoid score I2154
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D687493at2759
OrthoFinder 1 1.000 - - FOG0002425
OrthoInspector 1 1.000 - - oto4201
orthoMCL 1 0.900 - - OOG6_102652
Panther 1 1.100 - - LDO PTHR45831
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1609
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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