DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgt and spag1b

DIOPT Version :10

Sequence 1:NP_609842.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001428503.1 Gene:spag1b / 768178 ZFINID:ZDB-GENE-061013-512 Length:607 Species:Danio rerio


Alignment Length:226 Identity:58/226 - (25%)
Similarity:93/226 - (41%) Gaps:41/226 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VMSPDQTESIEVAIQCLQAAFDLGDDVEAAPAAAGEEQATTQSSSTASAPDDDAVASGSAGIGAA 87
            |:..:|.:...|...|....:...|..:...|.|||        |..:||             ||
Zfish   126 VLQTNQEKKKTVKTSCTPRPYTDWDRFDVDSACAGE--------SVRNAP-------------AA 169

  Fly    88 AAAVPNNIDMFELFQSL-----YTERNPESLALAESIKNEGNRLMKENKYNEALLQYNRAIAFDP 147
            ||..|      |:.|.|     .|.:..::.||.|  |::||...:...|.|||..|.|:::...
Zfish   170 AAVCP------EVQQRLSSCTALTAQEKQTAALRE--KDKGNEAYRSRDYEEALDYYCRSLSLAS 226

  Fly   148 KNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGNFEKAEQAYAKAIE 212
            ...:|. |||...|||.:...|::||.:.|....:..||..|....:.::|:.:::.......::
Zfish   227 SAAVFN-NRAQTLIRLQQWPAALSDCDAVLQLEPHNIKALLRRATVHKHLGHQQESHDDLRAVLQ 290

  Fly   213 LEPDNEVYKSNLEAARNARNQPPQ----TGR 239
            ::|.|:.....|  |..:...|||    |||
Zfish   291 IQPQNKTALKLL--ADVSSTDPPQQTRRTGR 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_609842.1 SGTA_dimer 7..>48 CDD:465168 4/24 (17%)
TPR 116..>233 CDD:440225 29/116 (25%)
TPR repeat 116..144 CDD:276809 10/27 (37%)
TPR repeat 149..179 CDD:276809 11/29 (38%)
TPR repeat 184..212 CDD:276809 4/27 (15%)
spag1bNP_001428503.1 None

Return to query results.
Submit another query.