DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sgt and Ttc33

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001342549.1 Gene:Ttc33 / 67515 MGIID:1914765 Length:262 Species:Mus musculus


Alignment Length:192 Identity:46/192 - (23%)
Similarity:86/192 - (44%) Gaps:26/192 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GEE--QATTQSSSTASAPDDDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTERNPESL-----A 114
            ||:  :||:|.....:|.:.|| |....|....|                 ::|..|:|     .
Mouse    11 GEKVSKATSQQFEAEAADEKDA-AENEDGNWLQA-----------------SKRRKETLQEGCKQ 57

  Fly   115 LAESIKNEGNRLMKENKYNEALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVY 179
            .::.:|:||.:|.:..:|.||:.:::.|:...|.:...|..::...:.|.|...||...:.|:..
Mouse    58 RSQQLKDEGAQLAENKRYKEAIQKWDEALQLTPGDATLYEMKSQVLLSLHEMFPAVHAAEMAVKR 122

  Fly   180 NNNYSKAYCRLGVAYSNMGNFEKAEQAYAKAIELEPDN-EVYKSNLEAARNARNQPPQTGRL 240
            |.:..:|:..||.|...:|....|.:::..|:.:.|.| |::|.:|..||..:.|.....|:
Mouse   123 NPHSWEAWQTLGRAQLGLGEIVLAIRSFQIALHIYPMNPELWKEDLSWARKLQEQQKVAQRI 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154
TPR_11 116..177 CDD:290150 14/60 (23%)
TPR_2 116..149 CDD:285020 9/32 (28%)
TPR repeat 116..144 CDD:276809 8/27 (30%)
TPR_17 139..170 CDD:290167 5/30 (17%)
TPR repeat 149..179 CDD:276809 6/29 (21%)
TPR_16 156..218 CDD:290168 15/62 (24%)
TPR_1 184..217 CDD:278916 8/32 (25%)
TPR repeat 184..212 CDD:276809 7/27 (26%)
Ttc33NP_001342549.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..63 12/63 (19%)
YfgC <42..164 CDD:227122 30/138 (22%)
TPR 1 59..92 9/32 (28%)
TPR repeat 59..87 CDD:276809 8/27 (30%)
TPR repeat 92..122 CDD:276809 6/29 (21%)
TPR 2 93..126 7/32 (22%)
TPR 3 127..160 8/32 (25%)
TPR repeat 127..154 CDD:276809 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0553
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.