DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and TTC12

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_005271661.1 Gene:TTC12 / 54970 HGNCID:23700 Length:777 Species:Homo sapiens


Alignment Length:319 Identity:74/319 - (23%)
Similarity:134/319 - (42%) Gaps:45/319 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 QSFVRSFIDYLKKQGDVMSPDQTESIEVAIQCLQAAFDLGDDVEAAPAAAGEEQATTQSSSTASA 71
            |.|:::..:......::.|.|.....:..::..:....:.:|.|       |::..|..:.|..:
Human    10 QKFLKNVDEISNLIQEMNSDDPVVQQKAVLETEKRLLLMEEDQE-------EDECRTTLNKTMIS 67

  Fly    72 PDDDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTERNPESLALAESIKNEGNRLMKENKYNEAL 136
            |...|:.|... |.:.|.......|..|     ..:|..|:..||:::|.:||....|..|..|:
Human    68 PPQTAMKSAEE-INSEAFLASVEKDAKE-----RAKRRRENKVLADALKEKGNEAFAEGNYETAI 126

  Fly   137 LQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGNFE 201
            |:|:..:.......:.|.|||.|:::|.:.|:|:.||:.||..:...:|||..:|.|...:.|:.
Human   127 LRYSEGLEKLKDMKVLYTNRAQAYMKLEDYEKALVDCEWALKCDEKCTKAYFHMGKANLALKNYS 191

  Fly   202 KAEQAYAKAIELEPD---------NEV---YKSNLE--AARNARNQPPQTGRLREDLINMLSQPM 252
            .:.:.|.|.:|:.|.         |:|   .|::|:  .|....:....|....::|:..||:|.
Human   192 VSRECYKKILEINPKLQTQVKGYLNQVDLQEKADLQEKEAHELLDSGKNTAVTTKNLLETLSKPD 256

  Fly   253 VRNLFNNAEIDV---------EQLLSMLQNPMIM----NTIRQQFGGGNAPTLPNDMVQ 298
            ...||....|::         ||.|..:.|...:    ..||:.|.     |..||.|:
Human   257 QIPLFYAGGIEILTEMINECTEQTLFRMHNGFSIISDNEVIRRCFS-----TAGNDAVE 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154 3/38 (8%)
TPR_11 116..177 CDD:290150 19/60 (32%)
TPR_2 116..149 CDD:285020 9/32 (28%)
TPR repeat 116..144 CDD:276809 9/27 (33%)
TPR_17 139..170 CDD:290167 8/30 (27%)
TPR repeat 149..179 CDD:276809 12/29 (41%)
TPR_16 156..218 CDD:290168 20/70 (29%)
TPR_1 184..217 CDD:278916 10/41 (24%)
TPR repeat 184..212 CDD:276809 8/27 (30%)
TTC12XP_005271661.1 TPR_11 106..171 CDD:290150 21/64 (33%)
BamD 106..>164 CDD:276939 18/57 (32%)
TPR repeat 106..138 CDD:276939 9/31 (29%)
TPR repeat 106..134 CDD:276809 9/27 (33%)
TPR repeat 139..169 CDD:276809 12/29 (41%)
TPR_11 142..205 CDD:290150 21/62 (34%)
TPR_1 143..173 CDD:278916 12/29 (41%)
TPR repeat 174..202 CDD:276809 8/27 (30%)
TPR repeat 211..236 CDD:276809 5/24 (21%)
ARM 526..631 CDD:237987
armadillo repeat 555..591 CDD:293788
armadillo repeat 597..631 CDD:293788
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155691
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

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