DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and SGTB

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_061945.1 Gene:SGTB / 54557 HGNCID:23567 Length:304 Species:Homo sapiens


Alignment Length:315 Identity:96/315 - (30%)
Similarity:154/315 - (48%) Gaps:63/315 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VRSFIDYLKKQG--DVMSPDQTESIEVAIQCLQAAFDLGDDVEAAPAAAGEEQATTQSSSTASAP 72
            |.:.|.:|::|.  |..:.|:.||:|||||||:..|.:                         :|
Human     8 VYAVIRFLREQSQMDTYTSDEQESLEVAIQCLETVFKI-------------------------SP 47

  Fly    73 DDDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTERN--------PESLALAESIKNEGNRLMKE 129
            :|..:|...              .:.|:|.|.:.:.:        ||.:..|:.:|:|||..|||
Human    48 EDTHLAVSQ--------------PLTEMFTSSFCKNDVLPLSNSVPEDVGKADQLKDEGNNHMKE 98

  Fly   130 NKYNEALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAY 194
            ..|..|:..|.:||..||.|.::|||||||..:||....|:.||:.|:..::.|||||.|:|:|.
Human    99 ENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLAL 163

  Fly   195 SNMGNFEKAEQAYAKAIELEPDNEVYKSNLEAARNARNQ---PPQTGRLREDLINMLSQP----M 252
            :.:..||:|..:|.||::|:|:|:.|||||:.|.....:   |..|| |..|:.::::.|    |
Human   164 TALNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGTG-LSFDMASLINNPAFISM 227

  Fly   253 VRNLFNNAEIDVEQLLSMLQNPMIMNTIRQQFGGGNAPTLPNDMVQMIYNMTSQL 307
            ..:|..|.:  |:||:|    .|:.|.|.....|....|..:.::|.......|:
Human   228 AASLMQNPQ--VQQLMS----GMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154 16/39 (41%)
TPR_11 116..177 CDD:290150 28/60 (47%)
TPR_2 116..149 CDD:285020 15/32 (47%)
TPR repeat 116..144 CDD:276809 12/27 (44%)
TPR_17 139..170 CDD:290167 15/30 (50%)
TPR repeat 149..179 CDD:276809 14/29 (48%)
TPR_16 156..218 CDD:290168 26/61 (43%)
TPR_1 184..217 CDD:278916 15/32 (47%)
TPR repeat 184..212 CDD:276809 13/27 (48%)
SGTBNP_061945.1 SGTA_dimer 5..64 CDD:318697 21/94 (22%)
TPR 1 15..49 15/58 (26%)
PLN03088 85..>237 CDD:330826 61/154 (40%)
TPR 2 85..118 15/32 (47%)
TPR repeat 85..113 CDD:276809 12/27 (44%)
TPR repeat 118..148 CDD:276809 14/29 (48%)
TPR 3 119..152 13/32 (41%)
TPR 4 153..186 15/32 (47%)
TPR repeat 153..181 CDD:276809 13/27 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0553
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10409
Inparanoid 1 1.050 137 1.000 Inparanoid score I4551
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55994
OrthoDB 1 1.010 - - D501335at33208
OrthoFinder 1 1.000 - - FOG0002425
OrthoInspector 1 1.000 - - otm40393
orthoMCL 1 0.900 - - OOG6_102652
Panther 1 1.100 - - O PTHR45831
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1333
SonicParanoid 1 1.000 - - X1609
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.870

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