DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and ttc1

DIOPT Version :10

Sequence 1:NP_609842.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:XP_068071942.1 Gene:ttc1 / 492510 ZFINID:ZDB-GENE-041114-80 Length:355 Species:Danio rerio


Alignment Length:313 Identity:70/313 - (22%)
Similarity:114/313 - (36%) Gaps:85/313 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DYLKKQGDVMSPD---------QTESIEVAIQCLQAAFDLGDDVEAAPAAA--------GEEQAT 62
            |.:..|.|.:..|         :||.:|....||..: |..|:.......:        .|||..
Zfish    70 DVIMAQNDRLEADARTEKDFGSETERLENTKPCLDHS-DRSDENRRDSLTSDPHLDKDNDEEQEK 133

  Fly    63 TQSSSTASAP-----------DDDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTE----RNPES 112
            .::...:.|.           ||:.:.                    ||.:.|..|    |..||
Zfish   134 WENDEHSDAEFKEETVKVAEYDDEYLR--------------------ELEKDLTEEDRESRRKES 178

  Fly   113 LALAESIKNEGNRLMKENKYNEALLQYNRA-----IAFDPKNPIFYCNRAAAHIRLGENERAVTD 172
            |.|    |.:||...|..::.||...|:.|     :.|.....|.:.||||:.:...:.:.|::|
Zfish   179 LEL----KEKGNAQFKSGEHVEAEESYSAALKLCPVCFTKDRSILFSNRAASRLHQDKKDGAISD 239

  Fly   173 CKSALVYNNNYSKAYCRLGVAYSNMGNFEKAEQAYAKAIELEPDNEVYKSNLEAARNA-----RN 232
            |..|:..|.||.:|..|....|......::|.:.|...:|.:|       .:.|||.|     |.
Zfish   240 CSKAIELNPNYVRAILRRAELYEKTDKLDEALEDYKTVLEKDP-------GIPAAREACMRLPRQ 297

  Fly   233 QPPQTGRLRE-------DLINMLSQPM---VRNLFNNAEIDV-EQLLSMLQNP 274
            ...:..:::|       ||.||:.:|.   ..|...|.:.:. ...::.:|||
Zfish   298 IEERNEKMKEEMMSKLKDLGNMILRPFGLSTSNFQVNQDTNTGSYSINFVQNP 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_609842.1 SGTA_dimer 7..>48 CDD:465168 10/41 (24%)
TPR 116..>233 CDD:440225 33/126 (26%)
TPR repeat 116..144 CDD:276809 8/32 (25%)
TPR repeat 149..179 CDD:276809 9/29 (31%)
TPR repeat 184..212 CDD:276809 5/27 (19%)
ttc1XP_068071942.1 NlpI <152..>287 CDD:443815 39/165 (24%)
TPR repeat 181..206 CDD:276809 9/28 (32%)
TPR repeat 216..246 CDD:276809 9/29 (31%)
TPR repeat 251..279 CDD:276809 5/27 (19%)

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