DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and Stip1

DIOPT Version :10

Sequence 1:NP_609842.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_477354.1 Gene:Stip1 / 33202 FlyBaseID:FBgn0024352 Length:490 Species:Drosophila melanogaster


Alignment Length:191 Identity:56/191 - (29%)
Similarity:87/191 - (45%) Gaps:23/191 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NPESLALAESIKNEGNRLMKENKYNEALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDC 173
            |||.   ||..|.:||...|:..|:.|:..|..||..:|.:|..|.||||.:.:|...:..:.||
  Fly   306 NPEK---AEEEKEQGNLFFKKGDYSTAVKHYTEAIKRNPDDPKLYSNRAACYTKLAAFDLGLKDC 367

  Fly   174 KSALVYNNNYSKAYCRLGVAYSNMGNFEKAEQAYAKAIELEPDN----EVY--------KSNLEA 226
            .:.:..:..:.|.|.|.|.....|....||:.||.||:||:|:|    |.|        ::..|.
  Fly   368 DTCIKLDEKFIKGYIRKGKILQGMQQQSKAQAAYQKALELDPNNAEAIEGYRQCSMNFQRNPQEV 432

  Fly   227 ARNARNQPPQTGRLREDLINMLSQPMVRNLFNNAEIDVEQLLSMLQNPMIMNTIRQQFGGG 287
            .:||.:.|        ::..:|..|.:|.:....:.|...:...||||.|.:.|.:....|
  Fly   433 LKNAMSDP--------EIQQILKDPAMRMILEQMQSDPNAVKEHLQNPAIADKIMKLLESG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_609842.1 SGTA_dimer 7..>48 CDD:465168
TPR 116..>233 CDD:440225 41/128 (32%)
TPR repeat 116..144 CDD:276809 10/27 (37%)
TPR repeat 149..179 CDD:276809 9/29 (31%)
TPR repeat 184..212 CDD:276809 11/27 (41%)
Stip1NP_477354.1 TPR repeat 7..32 CDD:276809
TPR 10..276 CDD:440225
TPR repeat 37..67 CDD:276809
TPR repeat 72..100 CDD:276809
LapB 173..415 CDD:442196 39/111 (35%)
TPR repeat 175..203 CDD:276809
TPR repeat 208..238 CDD:276809
TPR repeat 250..278 CDD:276809
TPR repeat 310..338 CDD:276809 10/27 (37%)
TPR repeat 343..373 CDD:276809 9/29 (31%)
TPR repeat 378..406 CDD:276809 11/27 (41%)
STI1 429..482 CDD:436075 14/60 (23%)
Blue background indicates that the domain is not in the aligned region.

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