DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and SPAC1142.02c

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001342950.1 Gene:SPAC1142.02c / 2542401 PomBaseID:SPAC1142.02c Length:317 Species:Schizosaccharomyces pombe


Alignment Length:356 Identity:104/356 - (29%)
Similarity:158/356 - (44%) Gaps:87/356 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFIDYLKK---QGDVMSPDQTESIEVAIQCLQAAFDLGDDVEAAPAAAGEEQATTQSSSTASAPD 73
            :.|||||:   .|.: |.::.||:|||.||:|.:|.:                         .|:
pombe     9 AIIDYLKQAITTGSI-SEEEKESLEVAAQCIQDSFKI-------------------------KPE 47

  Fly    74 DDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTERNPESLAL----AESIKNEGNRLMKENKYNE 134
            :....||...:.|           ||.::.|:......:..:    ||.:|.|||..:....|.:
pombe    48 EIKPKSGDRLVAA-----------FEEYEKLHPVEEDSTAHVNKEEAEKLKLEGNNAIAAKDYQK 101

  Fly   135 ALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGN 199
            ||..|.:||..||.:|::|.|||||:.:||:.|.||.|..:.|..:.::::|:.|||.|..::|:
pombe   102 ALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGD 166

  Fly   200 FEKAEQAYAKAIELEPDNEVYKSNLEAARNARNQP-------------------PQTGRL----R 241
            ...|..||.|.::.:|:|||.|..||||....|||                   |..|.:    .
pombe   167 AAAAADAYKKGLDFDPNNEVLKRGLEAANKQLNQPSDSSATSGADQARTSAGAAPDLGSIFGGGM 231

  Fly   242 EDLINMLSQPMVRNLFNNAEIDVEQLLSMLQNPMIMNTIRQ-QFGGG--------NAPTLPNDMV 297
            .||.::::.|.|.|:..|. :....|.:::.:|.|.|..|. |.|||        |.|.|.|...
pombe   232 PDLGSLMNNPAVMNMARNL-MQSGALNNIMNDPNIANMARNFQSGGGMPDLSSLANNPQLQNLAR 295

  Fly   298 QMIYNMTSQLTGFPNSNANPGNEQQPGNQPP 328
            ..:.|         |:|.|..|..| ||.||
pombe   296 NFMNN---------NNNGNTDNNNQ-GNPPP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154 16/38 (42%)
TPR_11 116..177 CDD:290150 27/60 (45%)
TPR_2 116..149 CDD:285020 14/32 (44%)
TPR repeat 116..144 CDD:276809 11/27 (41%)
TPR_17 139..170 CDD:290167 15/30 (50%)
TPR repeat 149..179 CDD:276809 14/29 (48%)
TPR_16 156..218 CDD:290168 22/61 (36%)
TPR_1 184..217 CDD:278916 11/32 (34%)
TPR repeat 184..212 CDD:276809 10/27 (37%)
SPAC1142.02cNP_001342950.1 SGTA_dimer 4..>53 CDD:318697 17/69 (25%)
PLN03088 59..>165 CDD:330826 37/116 (32%)
TPR repeat 83..111 CDD:276809 11/27 (41%)
TPR repeat 116..146 CDD:276809 14/29 (48%)
TPR repeat 151..179 CDD:276809 10/27 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0553
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10409
Inparanoid 1 1.050 120 1.000 Inparanoid score I1495
OMA 1 1.010 - - QHG55994
OrthoFinder 1 1.000 - - FOG0002425
OrthoInspector 1 1.000 - - oto100522
orthoMCL 1 0.900 - - OOG6_102652
Panther 1 1.100 - - LDO PTHR45831
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1333
SonicParanoid 1 1.000 - - X1609
TreeFam 1 0.960 - -
1312.860

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