DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and sgt2

DIOPT Version :10

Sequence 1:NP_609842.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001342950.1 Gene:sgt2 / 2542401 PomBaseID:SPAC1142.02C Length:317 Species:Schizosaccharomyces pombe


Alignment Length:356 Identity:104/356 - (29%)
Similarity:158/356 - (44%) Gaps:87/356 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SFIDYLKK---QGDVMSPDQTESIEVAIQCLQAAFDLGDDVEAAPAAAGEEQATTQSSSTASAPD 73
            :.|||||:   .|.: |.::.||:|||.||:|.:|.:                         .|:
pombe     9 AIIDYLKQAITTGSI-SEEEKESLEVAAQCIQDSFKI-------------------------KPE 47

  Fly    74 DDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTERNPESLAL----AESIKNEGNRLMKENKYNE 134
            :....||...:.|           ||.::.|:......:..:    ||.:|.|||..:....|.:
pombe    48 EIKPKSGDRLVAA-----------FEEYEKLHPVEEDSTAHVNKEEAEKLKLEGNNAIAAKDYQK 101

  Fly   135 ALLQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGN 199
            ||..|.:||..||.:|::|.|||||:.:||:.|.||.|..:.|..:.::::|:.|||.|..::|:
pombe   102 ALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGD 166

  Fly   200 FEKAEQAYAKAIELEPDNEVYKSNLEAARNARNQP-------------------PQTGRL----R 241
            ...|..||.|.::.:|:|||.|..||||....|||                   |..|.:    .
pombe   167 AAAAADAYKKGLDFDPNNEVLKRGLEAANKQLNQPSDSSATSGADQARTSAGAAPDLGSIFGGGM 231

  Fly   242 EDLINMLSQPMVRNLFNNAEIDVEQLLSMLQNPMIMNTIRQ-QFGGG--------NAPTLPNDMV 297
            .||.::::.|.|.|:..|. :....|.:::.:|.|.|..|. |.|||        |.|.|.|...
pombe   232 PDLGSLMNNPAVMNMARNL-MQSGALNNIMNDPNIANMARNFQSGGGMPDLSSLANNPQLQNLAR 295

  Fly   298 QMIYNMTSQLTGFPNSNANPGNEQQPGNQPP 328
            ..:.|         |:|.|..|..| ||.||
pombe   296 NFMNN---------NNNGNTDNNNQ-GNPPP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_609842.1 SGTA_dimer 7..>48 CDD:465168 16/38 (42%)
TPR 116..>233 CDD:440225 47/116 (41%)
TPR repeat 116..144 CDD:276809 11/27 (41%)
TPR repeat 149..179 CDD:276809 14/29 (48%)
TPR repeat 184..212 CDD:276809 10/27 (37%)
sgt2NP_001342950.1 SGTA_dimer 5..63 CDD:465168 21/90 (23%)
3a0801s09 59..>165 CDD:273380 37/116 (32%)
Spy 71..>295 CDD:443119 71/224 (32%)
TPR repeat 83..111 CDD:276809 11/27 (41%)
TPR repeat 116..146 CDD:276809 14/29 (48%)
TPR repeat 151..179 CDD:276809 10/27 (37%)

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