DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and Sgtb

DIOPT Version :9

Sequence 1:NP_001246058.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001347983.1 Gene:Sgtb / 218544 MGIID:2444615 Length:304 Species:Mus musculus


Alignment Length:308 Identity:97/308 - (31%)
Similarity:152/308 - (49%) Gaps:49/308 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VRSFIDYLKKQG--DVMSPDQTESIEVAIQCLQAAFDLG-DDVEAAPAAAGEEQATTQSSSTASA 71
            |.:.|.:|::|.  |..:.|:.||:|||||||:..|.:. :|...|.:     |..|:..:.:..
Mouse     8 VYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKISPEDTHLAVS-----QPLTEMFTNSVC 67

  Fly    72 PDDDAVASGSAGIGAAAAAVPNNIDMFELFQSLYTERNPESLALAESIKNEGNRLMKENKYNEAL 136
            .:|....|.|.                           ||.:..|:.:|:|||..|||..|..|:
Mouse    68 KNDIRPLSNSV---------------------------PEDVGKADQLKDEGNNHMKEENYAAAV 105

  Fly   137 LQYNRAIAFDPKNPIFYCNRAAAHIRLGENERAVTDCKSALVYNNNYSKAYCRLGVAYSNMGNFE 201
            ..|.:||..||.|.::|||||||..:|.....|:.||:.|:..::.|||||.|:|:|.:.|..||
Mouse   106 DCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFE 170

  Fly   202 KAEQAYAKAIELEPDNEVYKSNLEAARNARNQ---PPQTGRLREDLINMLSQP----MVRNLFNN 259
            :|..:|.||::|:|:|:.|||||:.|.....:   |..|| |..|:.::::.|    |..:|..|
Mouse   171 EAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGTG-LSFDMASLINNPAFITMAASLMQN 234

  Fly   260 AEIDVEQLLSMLQNPMIMNTIRQQFGGGNAPTLPNDMVQMIYNMTSQL 307
            .:  |:||:|    .|:.|.|.....|....|..:.::|.......|:
Mouse   235 PQ--VQQLMS----GMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQI 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_001246058.1 SGTA_dimer 9..>48 CDD:293154 16/40 (40%)
TPR_11 116..177 CDD:290150 27/60 (45%)
TPR_2 116..149 CDD:285020 15/32 (47%)
TPR repeat 116..144 CDD:276809 12/27 (44%)
TPR_17 139..170 CDD:290167 14/30 (47%)
TPR repeat 149..179 CDD:276809 13/29 (45%)
TPR_16 156..218 CDD:290168 26/61 (43%)
TPR_1 184..217 CDD:278916 16/32 (50%)
TPR repeat 184..212 CDD:276809 14/27 (52%)
SgtbNP_001347983.1 SGTA_dimer 5..64 CDD:318697 20/60 (33%)
TPR 1 15..49 14/33 (42%)
PLN03088 85..>237 CDD:330826 61/154 (40%)
TPR 2 85..118 15/32 (47%)
TPR repeat 85..113 CDD:276809 12/27 (44%)
TPR repeat 118..148 CDD:276809 13/29 (45%)
TPR 3 120..152 12/31 (39%)
TPR 4 153..186 16/32 (50%)
TPR repeat 153..181 CDD:276809 14/27 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0553
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10409
Inparanoid 1 1.050 136 1.000 Inparanoid score I4539
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55994
OrthoDB 1 1.010 - - D501335at33208
OrthoFinder 1 1.000 - - FOG0002425
OrthoInspector 1 1.000 - - otm42465
orthoMCL 1 0.900 - - OOG6_102652
Panther 1 1.100 - - O PTHR45831
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1333
SonicParanoid 1 1.000 - - X1609
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.870

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