DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sgt and ttc-1

DIOPT Version :10

Sequence 1:NP_609842.1 Gene:Sgt / 35052 FlyBaseID:FBgn0032640 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_492795.1 Gene:ttc-1 / 172965 WormBaseID:WBGene00016390 Length:207 Species:Caenorhabditis elegans


Alignment Length:61 Identity:16/61 - (26%)
Similarity:22/61 - (36%) Gaps:19/61 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NDNG-----EIETKGVVQSGRLVNGIGVRIERYKFAVSLRYFNQYVCGASIITPSHALTSA 85
            ||||     |.|.:|:..:..:.||              :||.......|..|||....:|
 Worm   148 NDNGRGYGNEEEKQGMSDTRVMENG--------------KYFYDTRGRNSENTPSRGYENA 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SgtNP_609842.1 SGTA_dimer 7..>48 CDD:465168 7/22 (32%)
TPR 116..>233 CDD:440225
TPR repeat 116..144 CDD:276809
TPR repeat 149..179 CDD:276809
TPR repeat 184..212 CDD:276809
ttc-1NP_492795.1 TPR repeat 18..46 CDD:276809
3a0801s09 <20..>115 CDD:273380
TPR repeat 56..86 CDD:276809
TPR repeat 91..120 CDD:276809
Blue background indicates that the domain is not in the aligned region.

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