DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18563 and zgc:92313

DIOPT Version :9

Sequence 1:NP_609841.2 Gene:CG18563 / 35050 FlyBaseID:FBgn0032639 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_001002596.1 Gene:zgc:92313 / 436869 ZFINID:ZDB-GENE-040718-339 Length:309 Species:Danio rerio


Alignment Length:246 Identity:71/246 - (28%)
Similarity:122/246 - (49%) Gaps:13/246 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 GGRCNTTGLYSWVVALFYEE-VYLTGGSLISPKVILTAAHNTMNKMNEDRIVVRAGEFVMNTTNE 199
            ||.....|.:.|.|.:..|: .::.||::||...:|:|||...|..:....::.||...:|..| 
Zfish    37 GGSSAADGAWPWQVDIQGEKSKHVCGGTIISENWVLSAAHCFPNPNDISGYLIYAGRQQLNGWN- 100

  Fly   200 PIQYEERVVERIVRHEGFIFQSGINNVALIFVKTPFVLNDRIGVLTLPSRQASF-EGRRCTVAGW 263
            |.:...| :.|:|...|:.......::||:.:.||||..:||..:.||.....| ...||.:.||
Zfish   101 PDETSHR-ISRVVVPLGYTDPQLGQDIALVELATPFVYTERIQPVCLPYANVEFTSDMRCMITGW 164

  Fly   264 -DLVSSHDQSRMRIIKKLELTVLDRTTCVAQF-RNTTLGRNFDLHPSLICAR-SEINRDFCFGGG 325
             |:........:..::::::.::|...|...| .|.|  .|.|:.|.::||. .:..:|.|.|..
Zfish   165 GDIREGVALQGVGPLQEVQVPIIDSQICQDMFLTNPT--ENIDIRPDMMCAGFQQGGKDSCQGDS 227

  Fly   326 GYALFCSLGDENPHVFEQAGIVAWGMGCG-LDLPGIYTNVAMFRSWIYNRI 375
            |..|.|.:.|.:   :.|||||::|:||. .:.||:|..|:.|.::|...:
Zfish   228 GGPLACQISDGS---WVQAGIVSFGLGCAEANRPGVYAKVSSFTNFIQTHV 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18563NP_609841.2 Tryp_SPc 147..373 CDD:238113 68/231 (29%)
Tryp_SPc 147..371 CDD:214473 67/229 (29%)
zgc:92313NP_001002596.1 Tryp_SPc 34..271 CDD:214473 70/240 (29%)
Tryp_SPc 35..274 CDD:238113 71/243 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587552
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.