DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18563 and Prss28

DIOPT Version :9

Sequence 1:NP_609841.2 Gene:CG18563 / 35050 FlyBaseID:FBgn0032639 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_444489.2 Gene:Prss28 / 114661 MGIID:2149951 Length:274 Species:Mus musculus


Alignment Length:264 Identity:69/264 - (26%)
Similarity:126/264 - (47%) Gaps:35/264 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 RTQP----GGRCNTTGLYSWVVAL---FYEE---VYLTGGSLISPKVILTAAHNTMNKMNEDRIV 186
            |::|    ||:|...|.:.|.|:|   .||.   |::.|||:|.|:.|||||| .:...:.|..|
Mouse    25 RSKPVGIVGGQCTPPGKWPWQVSLRMYSYEVNSWVHICGGSIIHPQWILTAAH-CIQSQDADPAV 88

  Fly   187 --VRAGEFVMNTTNEPIQYEERVVERIVRHEGFIFQSGINNVALIFVKTPFVLNDRIGVLTLPSR 249
              |:.||..:....|.:.     :.||:.|..:...|...::||:.:....|.:..:..::||..
Mouse    89 YRVQVGEVYLYKEQELLN-----ISRIIIHPDYNDVSKRFDLALMQLTALLVTSTNVSPVSLPKD 148

  Fly   250 QASFEGR-RCTVAGW-DLVSSHDQSRMRIIKKLELTVLDRTTCVAQFRNTTLGRNFDLHPS---- 308
            .::|:.. :|.:.|| :|:..........:.::::.:.|..:|...:|.    ::.|.|.:    
Mouse   149 SSTFDSTDQCWLVGWGNLLQRVPLQPPYQLHEVKIPIQDNKSCKRAYRK----KSSDEHKAVAIF 209

  Fly   309 --LICARSEINRDFCFGGGGYALFCSLGDENPHVFEQAGIVAWGMGCGLDLPGIYTNVAMFRSWI 371
              ::||.:. .|..|||..|..|.|...::    :.|.|:|:.|:.|..:||.|::.|....:||
Mouse   210 DDMLCAGTS-GRGPCFGDSGGPLVCWKSNK----WIQVGVVSKGIDCSNNLPSIFSRVQSSLAWI 269

  Fly   372 YNRI 375
            :..|
Mouse   270 HQHI 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18563NP_609841.2 Tryp_SPc 147..373 CDD:238113 62/241 (26%)
Tryp_SPc 147..371 CDD:214473 60/239 (25%)
Prss28NP_444489.2 Tryp_SPc 31..272 CDD:238113 66/255 (26%)
Tryp_SPc 31..269 CDD:214473 64/252 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842914
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.