DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPH93 and Tpsab1

DIOPT Version :9

Sequence 1:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_062195.2 Gene:Tpsab1 / 54271 RGDID:3066 Length:310 Species:Rattus norvegicus


Alignment Length:303 Identity:89/303 - (29%)
Similarity:140/303 - (46%) Gaps:42/303 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 TNNGGNPTTNVGSSELL-------------SPSCGMSNANGLQMVEGITIDQ-ARPAQYPWAVAI 263
            |:|....|..|...:||             :||..|..       |||...| |...::||.|::
  Rat    26 TSNRARTTHCVRMLKLLLLTLPLLSSLVHAAPSLAMPR-------EGIVGGQEASGNKWPWQVSL 83

  Fly   264 FHNGQY---LAGGSLIQPNVVLTVAHRVITIETE---LVVRAGDWDLKSDREIFLSEQREVERAV 322
            ..|..|   ..|||||.|..|||.||.|...:.:   |.|:     |:.....:......|.:.:
  Rat    84 RVNDTYWMHFCGGSLIHPQWVLTAAHCVGPNKADPNKLRVQ-----LRKQYLYYHDHLLTVSQII 143

  Fly   323 IHEGFDFKSGANNLALLFLNSPFKLNDHIRTICLPTPNKSF-AGRRCTVAGWGKMRYEDQRYSTV 386
            .|..|.......::|||.|.:|..:..::.|:.||..:::| :|..|.|.|||.:..:.......
  Rat   144 SHPDFYIAQDGADIALLKLTNPVNITSNVHTVSLPPASETFPSGTLCWVTGWGNINNDVSLPPPF 208

  Fly   387 -LKKVQLLVVNRNVCE-KFLRSTRLGAKFELPK-NIICAGGELGRDTCTGDGGSALFCSIGGENS 448
             |::||:.:|...:|: |:.:....|....:.: :::|||.| |.|:|.||.|..|.|.:    .
  Rat   209 PLEEVQVPIVENRLCDLKYHKGLNTGDNVHIVRDDMLCAGNE-GHDSCQGDSGGPLVCKV----E 268

  Fly   449 GVYEQAGIVNWGVGCGQEGIPAIYTEVSKFTNWITEKLLPFDY 491
            ..:.|||:|:||.||.|...|.|||.|:.:.:|| .:.:|.|:
  Rat   269 DTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWI-YRYVPKDF 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPH93NP_609840.1 GRP <136..189 CDD:254089
Tryp_SPc 250..485 CDD:238113 75/245 (31%)
Tryp_SPc 252..482 CDD:214473 72/239 (30%)
Tpsab1NP_062195.2 Tryp_SPc 66..302 CDD:214473 74/245 (30%)
Tryp_SPc 66..302 CDD:238113 74/245 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346381
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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