DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPH93 and CG9372

DIOPT Version :9

Sequence 1:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_649132.1 Gene:CG9372 / 40137 FlyBaseID:FBgn0036891 Length:408 Species:Drosophila melanogaster


Alignment Length:289 Identity:83/289 - (28%)
Similarity:139/289 - (48%) Gaps:34/289 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 TTNFGNP---TNNGGNPTTNVGSSELLSPSCGMSNANGLQMVEGITIDQARPAQYPWAVAIFHNG 267
            |:|..:|   |:..|:....|...|  ...||:::....::..|   ..|.|.::||..|:...|
  Fly   136 TSNRFSPQVVTSADGDEPRIVNKPE--QRGCGITSRQFPRLTGG---RPAEPDEWPWMAALLQEG 195

  Fly   268 Q--YLAGGSLIQPNVVLTVAHRVITIETE-LVVRAGDWDLKSDREIFLSEQR----EVERAVIHE 325
            .  ...||.||....|||.||.:.....| :.||.|:::..     .|:|.|    .:...|:|.
  Fly   196 LPFVWCGGVLITDRHVLTAAHCIYKKNKEDIFVRLGEYNTH-----MLNETRARDFRIANMVLHI 255

  Fly   326 GFDFKSGANNLALLFLNSPFKLNDHIRTICLPTPNKSFAGRRCTVAGWGKMRYEDQRYSTVLKKV 390
            .::.::..|::|::.::.....|.:|..:|:|..|:.::.|...|.|||..::... :|.:|.:|
  Fly   256 DYNPQNYDNDIAIVRIDRATIFNTYIWPVCMPPVNEDWSDRNAIVTGWGTQKFGGP-HSNILMEV 319

  Fly   391 QLLVVNRNVC-EKFLRSTRLGAKFELPKNIICAG-GELGRDTCTGDGGSALFCSIGGENSGVYEQ 453
            .|.|..::.| ..|::        .:|...:||| .|.|:|:|.||.|..|...:..:.   :..
  Fly   320 NLPVWKQSDCRSSFVQ--------HVPDTAMCAGFPEGGQDSCQGDSGGPLLVQLPNQR---WVT 373

  Fly   454 AGIVNWGVGCGQEGIPAIYTEVSKFTNWI 482
            .|||:|||||||.|.|.|||.|.::.:||
  Fly   374 IGIVSWGVGCGQRGRPGIYTRVDRYLDWI 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPH93NP_609840.1 GRP <136..189 CDD:254089
Tryp_SPc 250..485 CDD:238113 73/242 (30%)
Tryp_SPc 252..482 CDD:214473 71/238 (30%)
CG9372NP_649132.1 CLIP 87..132 CDD:197829
Tryp_SPc 173..402 CDD:214473 72/248 (29%)
Tryp_SPc 176..402 CDD:238113 72/245 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457555
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.