DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPH93 and CG30287

DIOPT Version :9

Sequence 1:NP_609840.1 Gene:SPH93 / 35049 FlyBaseID:FBgn0032638 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_726083.1 Gene:CG30287 / 246530 FlyBaseID:FBgn0050287 Length:284 Species:Drosophila melanogaster


Alignment Length:287 Identity:87/287 - (30%)
Similarity:126/287 - (43%) Gaps:58/287 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 GSSELLSPSCGMSNAN-GL-QMVEGITIDQARPAQY---PWAVAIFHNGQYLAGGSLIQPNVVLT 283
            |...||.|.|..:.:. || :::.|      :||..   ||.|.|...|....|||||.|..|||
  Fly    21 GQPHLLDPQCVTARSEPGLYRVING------KPADLFSNPWMVIIIERGMMKCGGSLITPRYVLT 79

  Fly   284 VAHRVITIETELVVRAGDWDLKS------------DREIFLSEQREVERAVIHEGF-DFKSGANN 335
            .||.....:::|.||.||:|:..            .|||      .|.|..:...: :|:.  |:
  Fly    80 AAHCKSETKSQLTVRLGDYDVNQAVDCSSYGCIPRPREI------NVTRTYVPSHYTNFRK--ND 136

  Fly   336 LALLFLNSPFKLNDHIRTICLPTPNKSFAGR------RCTVAGWGKMRYEDQRYSTVLKKVQLLV 394
            :|||.|.:..:..|:||:|||...:.:::..      :....|||  |.|.:..|.||::..|..
  Fly   137 IALLRLETTVQYGDNIRSICLLMGDYTWSSNILKNLVKFNTTGWG--RTESRINSPVLQQASLTH 199

  Fly   395 VNRNVCEKFLRSTRLGAKFELPKNIICAGGELGRDTCTGDGGSALFC--SIGGENSGVYEQAGIV 457
            .:.:.|.:....       :|.|:.||.....| .||.||.|..|..  .||.|...:.  .|:|
  Fly   200 HHLSYCAQVFGK-------QLDKSHICVASSTG-STCQGDSGGPLTARVRIGSERRVIL--FGVV 254

  Fly   458 NWG-VGC-GQEGIPAIYTEVSKFTNWI 482
            ::| |.| |    |.:||.|..|.|||
  Fly   255 SYGAVHCFG----PTVYTNVIHFANWI 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPH93NP_609840.1 GRP <136..189 CDD:254089
Tryp_SPc 250..485 CDD:238113 79/259 (31%)
Tryp_SPc 252..482 CDD:214473 77/255 (30%)
CG30287NP_726083.1 Tryp_SPc 41..277 CDD:214473 78/265 (29%)
Tryp_SPc 42..280 CDD:238113 80/266 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24256
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.