DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dl and REL

DIOPT Version :9

Sequence 1:NP_001286014.1 Gene:dl / 35047 FlyBaseID:FBgn0260632 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_002899.1 Gene:REL / 5966 HGNCID:9954 Length:619 Species:Homo sapiens


Alignment Length:558 Identity:189/558 - (33%)
Similarity:264/558 - (47%) Gaps:77/558 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 PYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPY 111
            ||::|.|||..:.:||||:|||||||||||.:||..|:|||:|:|:.|.|:..|.::.|||:.||
Human     8 PYIEIIEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNRTYPSIQIMNYYGKGKVRITLVTKNDPY 72

  Fly   112 RPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSH 176
            :||||:||||: |:.|....|...|.....|.||||:|||||:::.|:..|.:..::||......
Human    73 KPHPHDLVGKD-CRDGYYEAEFGQERRPLFFQNLGIRCVKKKEVKEAIITRIKAGINPFNVPEKQ 136

  Fly   177 RFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKA--MSDLVICRLCSCSATVFG 239
            .......|||.||||||||:..|. |..|:.||||||.||:|.:|  .::|.|||:.....:|.|
Human   137 LNDIEDCDLNVVRLCFQVFLPDEH-GNLTTALPPVVSNPIYDNRAPNTAELRICRVNKNCGSVRG 200

  Fly   240 NTQIILLCEKVAKEDISVRFFEEKNGQSVWEAFGDFQHTDVHKQTAITFKTPRYHTLDITEPAKV 304
            ..:|.|||:||.|:||.|||.     .:.|||.|.|...|||:|.||.||||.| ...||||..|
Human   201 GDEIFLLCDKVQKDDIEVRFV-----LNDWEAKGIFSQADVHRQVAIVFKTPPY-CKAITEPVTV 259

  Fly   305 FIQLRRPSDGVTSEALPFEYVPMDSGKHTFWNLHRHLKRKPDEDLFQQILR-------------- 355
            .:|||||||...||::.|.|:|.:  |.|:.|   ..|::....|||::.:              
Human   260 KMQLRRPSDQEVSESMDFRYLPDE--KDTYGN---KAKKQKTTLLFQKLCQDHVETGFRHVDQDG 319

  Fly   356 LDAKREVQPPT-------IEVIDLDTPKIDVQREIPSEMEFNHEESQQSEPALEQEQSVQQEQYT 413
            |:......|||       |.|...:.|:..:...|.....|      :.||.|....:|.:|..|
Human   320 LELLTSGDPPTLASQSAGITVNFPERPRPGLLGSIGEGRYF------KKEPNLFSHDAVVREMPT 378

  Fly   414 QEQSLQQEQYTQ----EQSLQQEQYLQQLEQQQSFQLEEPMQQDQELPAQQSFDQAIDHLPDHTS 474
            ...|..:..|..    ...|.....:..|.......:..|..:........||....  ||.: |
Human   379 GVSSQAESYYPSPGPISSGLSHHASMAPLPSSSWSSVAHPTPRSGNTNPLSSFSTRT--LPSN-S 440

  Fly   475 DHIP--------EDMEAADAHAEAEAHRLRSEQEKEIDTIIDEKVRELEQLDLGQQLEPRPL--- 528
            ..||        .|:.|::|.....|           |.|:..:...:...||....:|..|   
Human   441 QGIPPFLRIPVGNDLNASNACIYNNA-----------DDIVGMEASSMPSADLYGISDPNMLSNC 494

  Fly   529 ------TANDKITEWMKSSEIEQQVHEPSPTAEADVLD 560
                  |::|.:.|......:...:..||..:..|..|
Human   495 SVNMMTTSSDSMGETDNPRLLSMNLENPSCNSVLDPRD 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlNP_001286014.1 RHD-n_Dorsal_Dif 47..220 CDD:143647 86/172 (50%)
IPT_NFkappaB 225..326 CDD:238582 50/100 (50%)
RELNP_002899.1 RHD-n_c-Rel 8..179 CDD:143649 86/172 (50%)
RHD_dimer 187..282 CDD:292797 49/100 (49%)
Nuclear localization signal. /evidence=ECO:0000255 290..295 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..437 4/39 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 572..593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157542
Domainoid 1 1.000 171 1.000 Domainoid score I3750
eggNOG 1 0.900 - - E1_2CMKZ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391433at33208
OrthoFinder 1 1.000 - - FOG0002243
OrthoInspector 1 1.000 - - mtm8582
orthoMCL 1 0.900 - - OOG6_105422
Panther 1 1.100 - - O PTHR24169
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2257
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.710

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