Protein Alignment dl and rela

DIOPT Version :10

• Sequence 1: NP_724054.1
• Gene: dl / 35047
• FlyBaseID: FBgn0260632
• Length: 999
• Species: Drosophila melanogaster
• Sequence 2: XP_012816239.2
• Gene: rela / 407869
• XenbaseID: XB-GENE-946506
• Length: 534
• Species: Xenopus tropicalis
• Alignment Length: 557
• Identity: 182/557 - (32%)
• Similarity: 262/557 - (47%)
• Gaps: 116/557 - (20%)

  Fly    36 LAQSTKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVV 100
            :..||......|:|:|.|||..:.:||||:|||||||||||..||...||:|||:|..|:|.|.:
 Frog    12 MVSSTVMPSSHPHVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINHYQGSARI 76

  Fly   101 VVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEAALKAREEI 165
            .:|.||||:|::||||.||||: ||.|....|::.:.....|.|||||||||:::|.|:..|...
 Frog    77 RISLVTKDSPHKPHPHELVGKD-CKDGYYEAELSPDRSIHSFQNLGIQCVKKREVEDAIAHRIRT 140

  Fly   166 RVDPFKTGFSHRFQP----SSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKA--MSD 224
            ..:||..      .|    |..|||:|.||||||:.....|:.. |||.|||:||:|.:|  .::
 Frog   141 NNNPFNV------PPEELKSDYDLNTVCLCFQVFIPDRAAGQVV-PLPFVVSQPIYDNRAPNTAE 198

  Fly   225 LVICRLCSCSATVFGNTQIILLCEKVAKEDISVRFFEEKNGQSVWEAFGDFQHTDVHKQTAITFK 289
            |.|||:...|.:..|..:|.|||:||.||||.|.|.     ...|||.|.|...|||:|.||.|:
 Frog   199 LKICRVNRNSGSCMGGDEIFLLCDKVQKEDIEVLFV-----LGNWEARGIFSQADVHRQVAIVFR 258

  Fly   290 TPRYHTLDITEPAKVFIQLRRPSDGVTSEALPFEYVPMDSGKHTFWNLHRHLKRKPDEDLFQQIL 354
            ||.:|...|.:..||.:|||||||...||.:.|:|:|.:...|     |...|||...|.|:..:
 Frog   259 TPAFHDTKIRQSVKVQMQLRRPSDKEVSEPMEFQYLPDEVDPH-----HIDEKRKRTLDSFKHYV 318

  Fly   355 R--------------------LDAKRE-----VQP------PTIEVIDLDTP--KID-------- 378
            :                    :..|.|     ::|      |.:..:....|  |:|
 Frog   319 KNPFAGGETRTPRRIAVPNRIVPTKSEPITASIRPSPSVPNPMVPSLSFSMPVLKVDSVTSASTR 383

  Fly   379 ---VQREIPSEMEFNHEESQQSEPALEQEQSVQQEQYTQEQSLQ---------QEQYTQEQSLQQ 431
               |.....|.:.|:.:...||:|. ..|..:....::.:.:|.         :.:.|...|:..
 Frog   384 LSTVNISDFSNLGFSSQPPPQSDPD-RIESFLNYPSFSGDANLDLVEMLPNDTESRCTSLSSIDN 447

  Fly   432 EQYLQQLEQQQ-----SFQLEEPMQQDQELPAQQSFDQAIDHLPDHTSDHIPEDMEAADAHAEAE 491
            ..:.|.|.:.|     |..|:||......|                        |...|:.|...
 Frog   448 SDFSQLLSESQTSGTLSAGLQEPGTSQGTL------------------------MSYPDSIARLM 488

  Fly   492 AHR-LRSEQEKEIDTIIDEKVRELEQ--------LDL 519
            ::| :..:.|:.||:::...|.:::|        |||
 Frog   489 SNRPIEDDGEERIDSVLMNGVFDMQQGVESITSLLDL 525

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dl	NP_724054.1	RHD-n_Dorsal_Dif	47..220	CDD:143647	87/176 (49%)
		IPT_NFkappaB	225..326	CDD:238582	47/100 (47%)
rela	XP_012816239.2	RHD-n_RelA	23..192	CDD:143645	87/176 (49%)
		IPT_NFkappaB	199..295	CDD:238582	47/100 (47%)