DRSC/TRiP Functional Genomics Resources

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Protein Alignment dl and rel

DIOPT Version :9

Sequence 1:NP_001286014.1 Gene:dl / 35047 FlyBaseID:FBgn0260632 Length:999 Species:Drosophila melanogaster
Sequence 2:NP_001096177.1 Gene:rel / 100124724 XenbaseID:XB-GENE-993262 Length:567 Species:Xenopus tropicalis


Alignment Length:405 Identity:157/405 - (38%)
Similarity:224/405 - (55%) Gaps:48/405 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 LPAQQQQQLAQSTKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIV 92
            :.||..|.....|.....:||::|.|||..:.:|:||:||||.||||.|..||..|:|||:|:|:
 Frog     1 MTAQHSQHGRLHTTFGLNEPYIEIFEQPRQRGMRYRYKCEGRCAGSILGETSTENNRTYPSIKIM 65

  Fly    93 GYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIEA 157
            .|.|:.::.::.|||:.||:||||:||||: |:.|...||..|:.....|.|||||||::|::..
 Frog    66 NYTGKGILRITLVTKNEPYKPHPHDLVGKD-CRDGYYELEFGSDRTVLCFQNLGIQCVRRKEVRE 129

  Fly   158 ALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKA- 221
            |:..|...:::||.............|||.||||||||:..|. |.:|..||||||.||:|.:| 
 Frog   130 AIHTRIMRKMNPFGVREDQLLTIEDYDLNVVRLCFQVFLPDEH-GSYTRALPPVVSNPIYDNRAP 193

  Fly   222 -MSDLVICRLCSCSATVFGNTQIILLCEKVAKEDISVRFFEEKNGQSVWEAFGDFQHTDVHKQTA 285
             .::|.|||:.....:|.|..:|.|||:||.|:||.||||.:.     |||.|.|...|||:|.|
 Frog   194 NTAELRICRVNKNCGSVNGGDEIFLLCDKVQKDDIEVRFFTDN-----WEAKGTFGQADVHRQVA 253

  Fly   286 ITFKTPRYHTLDITEPAKVFIQLRRPSDGVTSEALPFEYVPMDSGKHTFWNLHRHLKRKPDEDLF 350
            |.||||.:|. .||:...|.:|||||||...||.:.|.|:|.....|.    ::..|:|..|.:.
 Frog   254 IVFKTPPFHR-SITDAVTVKMQLRRPSDQEVSEPMDFRYLPDPEDPHG----NKFKKQKTSEVMQ 313

  Fly   351 QQILRLDAKREVQPPTIEVIDLDTPKIDVQRE---------------IPSE---MEFNHEESQQS 397
            :....:..:|::.|||..|    .|   ::||               :|::   ..:|:..|.||
 Frog   314 KFKFEMQDRRDLNPPTFGV----NP---IKREHFTNSSGCGQRFLPMLPTKPACATYNNTTSPQS 371

  Fly   398 ---------EPALEQ 403
                     :|:|.|
 Frog   372 RVPKFNSNIQPSLSQ 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dlNP_001286014.1 RHD-n_Dorsal_Dif 47..220 CDD:143647 82/172 (48%)
IPT_NFkappaB 225..326 CDD:238582 49/100 (49%)
relNP_001096177.1 RHD-n 20..191 CDD:298664 82/172 (48%)
RHD_dimer 199..294 CDD:292797 48/100 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 159 1.000 Domainoid score I4039
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D391433at33208
OrthoFinder 1 1.000 - - FOG0002243
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24169
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2257
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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