Sequence 1: | NP_001162998.1 | Gene: | Dif / 35045 | FlyBaseID: | FBgn0011274 | Length: | 987 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012816239.2 | Gene: | rela / 407869 | XenbaseID: | XB-GENE-946506 | Length: | 534 | Species: | Xenopus tropicalis |
Alignment Length: | 564 | Identity: | 172/564 - (30%) |
---|---|---|---|
Similarity: | 260/564 - (46%) | Gaps: | 117/564 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 SLPVMPSHIPLHLQNQNMNQNLPEPSARSGPHLRIVEEPTSNIIRFRYKCEGRTAGSIPGMNSSS 112
Fly 113 ETGKTFPTIEVCNYDGPVIIVVSCVTSDEPFRQHPHWLVSKEEADACKSGIYQKKLPPEERRLVL 177
Fly 178 QKVGIQCAKKLEMRDSLVERERRNIDPFNA-----KFDHKDQIDKINRYELR---LCYQAFI--T 232
Fly 233 VGNSKVPLDPIVSSPIYG----KSSELTITRLCSCAATANGGDEIIMLCEKIAKDDIEVRFYETD 293
Fly 294 KDGRETWFANAEFQPTDVFKQMAIAFKTPRYRNTEITQSVNVELKLVRPSDGATSAPLPFEYYP- 357
Fly 358 --NPGTVTFARLQRKLKRRQELDVFQQILS---LDSET-TATKYSCPPMDLEEDNNTVSSDDQQS 416
Fly 417 SGTLN------EFEIAVKKMQMRQRGESHEMDGGTVTEYTDNDNEPDMEIELEVPQLLPQLADDC 475
Fly 476 TQTSTPMEEILQHPQLQSRPLSNVETITEWMKSSEFERTDSLTVENGD-TQSLSNSTAQTAFT-- 537
Fly 538 ------------------NVSSLTANTTITNQLDEEAHGLLANG 563 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dif | NP_001162998.1 | RHD-n_Dorsal_Dif | 78..252 | CDD:143647 | 79/187 (42%) |
RHD_dimer | 256..358 | CDD:292797 | 43/104 (41%) | ||
rela | XP_012816239.2 | RHD-n_RelA | 23..192 | CDD:143645 | 79/183 (43%) |
RHD_dimer | 200..296 | CDD:406564 | 42/101 (42%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 214 | 1.000 | Inparanoid score | I3530 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D391433at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002243 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9475 | |
Panther | 1 | 1.100 | - | - | O | PTHR24169 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.070 |