DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15141 and Ubr7

DIOPT Version :9

Sequence 1:NP_609837.1 Gene:CG15141 / 35044 FlyBaseID:FBgn0032635 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_006240537.1 Gene:Ubr7 / 314399 RGDID:1359144 Length:445 Species:Rattus norvegicus


Alignment Length:448 Identity:160/448 - (35%)
Similarity:223/448 - (49%) Gaps:83/448 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QSTITMLDVLEQEKELEDEYAAVLGASDEKSCTYAKGPIGRQALYSCLTCCPEAREDLDKAAGVC 85
            :..::::||||:::|||:|..||||.||.:.|:|::|.:.|||||:|.||.||..|    .||:|
  Rat    15 EPVVSLVDVLEEDEELENEACAVLGGSDSEKCSYSQGSVKRQALYACSTCTPEGEE----PAGIC 75

  Fly    86 LACSYRCHEHHELVELYTKRNFRCDCPTQRLG--KCSLNPQVEGVQPRNVGNLYNQNFQGLYCKC 148
            |||||.||..|:|.||||||||||||...:..  :|.|.|....|   |..|.||.||.||||.|
  Rat    76 LACSYECHGSHKLFELYTKRNFRCDCGNSKFKNLECKLFPDKSKV---NSCNKYNDNFFGLYCIC 137

  Fly   149 KRPYPDPDRTVEEVMLQCAICEDWFHLPHMKA--PGASDKWLDVCSEMICDGCMDAKPFLKDY-- 209
            |||||||:..|.:.|:||.:||||||..|:.|  |.:.|     ..||:|..||....||..|  
  Rat   138 KRPYPDPEDEVPDEMIQCVVCEDWFHGRHLGAIPPESGD-----FQEMVCQSCMRRCSFLWAYAA 197

  Fly   210 ----------------TGLALQPVLEDAKEDKPEADDSQLKNELDRSICDIMKVPEG-------- 250
                            .|:..|.|..     .|..||..|.|.:.....|::|...|        
  Rat   198 QLAADGGTACNEVTPRNGVKTQHVTR-----LPAEDDGLLLNAVGMGDQDVIKPANGAHQDKTLK 257

  Fly   251 ESQPDEGEPSQKRAKLD------------------------------DCR----RPKPTKEHQGA 281
            |:.|::|..:.|..|.:                              .||    :.|...:...|
  Rat   258 ENVPEQGRDADKEVKAERNDEPCTSSSSEAHLQTVFKNENIKTEPQSGCRLQELQAKQFLKKDAA 322

  Fly   282 AFWTNDWRKSLCQCSECLSLYKELAVEFLLDVEDSAKTYEERGMKRAEENSSYEQGIRALASIDR 346
            .:|..:||..||.|.:|:.:|.:|.|.||.|..|:...||.:| |..:.....:..:..|:|::|
  Rat   323 TYWPLNWRSRLCTCQDCMKMYGDLDVLFLTDECDTVLAYENKG-KSDQATDRRDPLMDTLSSMNR 386

  Fly   347 TQQIDAITEYNRMKDKLKEYLQAFAASKKVVTEEDINRFFAGMRNENNANL-GQPYFC 403
            .||::.|.|||.:|.:||:||:.||....||..|||.:||...:::....: |..|:|
  Rat   387 VQQVELICEYNDLKTELKDYLKRFADEGTVVKREDIQQFFEEFQSKKRRRVDGLQYYC 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15141NP_609837.1 zf-UBR 62..122 CDD:280386 35/61 (57%)
PHD_UBR7 145..199 CDD:277017 27/55 (49%)
Ubr7XP_006240537.1 zf-UBR 56..113 CDD:280386 35/60 (58%)
PHD_UBR7 134..185 CDD:277017 27/55 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344860
Domainoid 1 1.000 156 1.000 Domainoid score I4109
eggNOG 1 0.900 - - E1_KOG2752
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11998
Inparanoid 1 1.050 267 1.000 Inparanoid score I2961
OMA 1 1.010 - - QHG55347
OrthoDB 1 1.010 - - D1428122at2759
OrthoFinder 1 1.000 - - FOG0004989
OrthoInspector 1 1.000 - - oto98078
orthoMCL 1 0.900 - - OOG6_103861
Panther 1 1.100 - - LDO PTHR13513
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3524
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.