Protein Alignment Rpb11 and polr2j

DIOPT Version :9

• Sequence 1: NP_609836.1
• Gene: Rpb11 / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_001019571.1
• Gene: polr2j / 554099
• ZFINID: ZDB-GENE-050522-120
• Length: 117
• Species: Danio rerio
• Alignment Length: 115
• Identity: 91/115 - (79%)
• Similarity: 102/115 - (88%)
• Gaps: 0/115 - (0%)

  Fly     1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPH 65
            |||||.||||||:||||||....||||.||.:||:|||||||||:||:||||||.||||||||||
Zfish     1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAGYKVPH 65

  Fly    66 PLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKEG 115
            |||||.|||:|||.||||||||.||||||::||||.||||:.|||:|:||
Zfish    66 PLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEG 115

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb11	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	72/90 (80%)
polr2j	NP_001019571.1	RNAP_II_RPB11	14..105	CDD:132902	72/90 (80%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170595938
Domainoid	1	1.000	129	1.000	Domainoid score	I5228
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4542
Inparanoid	1	1.050	189	1.000	Inparanoid score	I3884
OMA	1	1.010	-	-		QHG54303
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	1	1.000	-	-		FOG0002958
OrthoInspector	1	1.000	-	-		oto38785
orthoMCL	1	0.900	-	-		OOG6_101401
Panther	1	1.100	-	-	LDO	PTHR13946
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2771
SonicParanoid	1	1.000	-	-		X1954
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	17	16.800