Protein Alignment Polr2J and polr2j

DIOPT Version :10

• Sequence 1: NP_609836.1
• Gene: Polr2J / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_001019571.1
• Gene: polr2j / 554099
• ZFINID: ZDB-GENE-050522-120
• Length: 117
• Species: Danio rerio
• Alignment Length: 115
• Identity: 91/115 - (79%)
• Similarity: 102/115 - (88%)
• Gaps: 0/115 - (0%)

  Fly     1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPH 65
            |||||.||||||:||||||....||||.||.:||:|||||||||:||:||||||.||||||||||
Zfish     1 MNAPPAFESFLLFEGEKKITITKDTKVPNACLFTLNKEDHTLGNIIRSQLLKDPQVLFAGYKVPH 65

  Fly    66 PLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKEG 115
            |||||.|||:|||.||||||||.||||||::||||.||||:.|||:|:||
Zfish    66 PLEHKVVIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEG 115

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2J	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	72/90 (80%)
polr2j	NP_001019571.1	RNAP_II_RPB11	14..105	CDD:132902	72/90 (80%)