Protein Alignment Rpb11 and POLR2J

DIOPT Version :9

• Sequence 1: NP_609836.1
• Gene: Rpb11 / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_001380848.1
• Gene: POLR2J / 5439
• HGNCID: 9197
• Length: 159
• Species: Homo sapiens
• Alignment Length: 117
• Identity: 86/117 - (73%)
• Similarity: 98/117 - (83%)
• Gaps: 2/117 - (1%)

  Fly     1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPH 65
            |||||.||||||:||||||....||||.||.:||||||||||||:|::||||||.||||||||||
Human     1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPH 65

  Fly    66 PLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKEGGD 117
            |||||.:||:|||.||||||||.||||||::||||.||||:  ::....|.|
Human    66 PLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFR--VRAGPGGAD 115

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb11	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	71/90 (79%)
POLR2J	NP_001380848.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	129	1.000	Domainoid score	I5243
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H4542
Inparanoid	1	1.050	189	1.000	Inparanoid score	I3903
Isobase	1	0.950	-	0	Normalized mean entropy	S336
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	1	1.000	-	-		FOG0002958
OrthoInspector	1	1.000	-	-		otm40450
orthoMCL	1	0.900	-	-		OOG6_101401
Panther	1	1.100	-	-	LDO	PTHR13946
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2771
SonicParanoid	1	1.000	-	-		X1954
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
User_Submission	0	0.000	Not matched by this tool.
	15	14.810