Protein Alignment Rpb11 and POLR1D

DIOPT Version :9

• Sequence 1: NP_609836.1
• Gene: Rpb11 / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_001361336.1
• Gene: POLR1D / 51082
• HGNCID: 20422
• Length: 133
• Species: Homo sapiens
• Alignment Length: 104
• Identity: 35/104 - (33%)
• Similarity: 55/104 - (52%)
• Gaps: 3/104 - (2%)

  Fly    14 EGEKKIIKELDTKV---TNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVIRI 75
            |||:|...|:....   .:...|.:::|||||||.:|..::|:|.|.|.||...||.|.|..:||
Human    20 EGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKNPEVEFCGYTTTHPSESKINLRI 84

  Fly    76 QTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKE 114
            ||.......|.|...:.:|:.......::|:.:||:.|:
Human    85 QTRGTLPAVEPFQRGLNELMNVCQHVLDKFEASIKDYKD 123

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb11	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	31/93 (33%)
POLR1D	NP_001361336.1	RNAP_I_III_AC19	30..114	CDD:132907	26/83 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	3	2.820