Protein Alignment Rpb11 and l(2)37Cg

DIOPT Version :9

• Sequence 1: NP_609836.1
• Gene: Rpb11 / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_001260563.1
• Gene: l(2)37Cg / 35196
• FlyBaseID: FBgn0086447
• Length: 132
• Species: Drosophila melanogaster
• Alignment Length: 48
• Identity: 21/48 - (43%)
• Similarity: 27/48 - (56%)
• Gaps: 0/48 - (0%)

  Fly    33 FTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQTTAD 80
            |....|.|||||.::..:.:.|.|.|.||.:|||.|.|...|||:..|
  Fly    47 FVFTNEGHTLGNALKTIIARYPEVDFCGYTIPHPTEQKLHFRIQSRRD 94

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb11	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	21/48 (44%)
l(2)37Cg	NP_001260563.1	RNAP_I_III_AC19	37..118	CDD:132907	21/48 (44%)
		RNA_pol_L	46..>80	CDD:279526	13/32 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45445044
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1761
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR13946
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850