Protein Alignment Rpb11 and rpb11

DIOPT Version :9

• Sequence 1: NP_609836.1
• Gene: Rpb11 / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_593333.1
• Gene: rpb11 / 2543112
• PomBaseID: SPAC3A12.07
• Length: 123
• Species: Schizosaccharomyces pombe
• Alignment Length: 105
• Identity: 52/105 - (49%)
• Similarity: 67/105 - (63%)
• Gaps: 1/105 - (0%)

  Fly     1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPH 65
            ||.|..:|...|. |..|:..|||:|..|||:.|:.||||||.||:.||||.|..||||||||||
pombe     1 MNQPERYELIELM-GLPKVTYELDSKSPNAAVVTLEKEDHTLANMLANQLLSDERVLFAGYKVPH 64

  Fly    66 PLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERF 105
            ||.|.|::|:||..|.||::..::|...|:..|...:..|
pombe    65 PLNHNFILRVQTVEDCSPKQVIVDAAKSLITHLEEIKVNF 104

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb11	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	46/90 (51%)
rpb11	NP_593333.1	RNAP_II_RPB11	14..104	CDD:132902	46/89 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	86	1.000	Domainoid score	I2189
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	106	1.000	Inparanoid score	I1613
OMA	1	1.010	-	-		QHG54303
OrthoFinder	1	1.000	-	-		FOG0002958
OrthoInspector	1	1.000	-	-		oto100562
orthoMCL	1	0.900	-	-		OOG6_101401
Panther	1	1.100	-	-	LDO	PTHR13946
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2771
SonicParanoid	1	1.000	-	-		X1954
TreeFam	1	0.960	-	-
	13	12.860