Protein Alignment Polr2J and Polr2j

DIOPT Version :10

• Sequence 1: NP_609836.1
• Gene: Polr2J / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_035423.2
• Gene: Polr2j / 20022
• MGIID: 109582
• Length: 117
• Species: Mus musculus
• Alignment Length: 115
• Identity: 90/115 - (78%)
• Similarity: 102/115 - (88%)
• Gaps: 0/115 - (0%)

  Fly     1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPH 65
            |||||.||||||:||||||....||||.||.:||||||||||||:|::||||||.||||||||||
Mouse     1 MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAGYKVPH 65

  Fly    66 PLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKEG 115
            |||||.:||:|||.||||||||.||||||::||||.||||:.|||:|:||
Mouse    66 PLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEG 115

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2J	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	71/90 (79%)
Polr2j	NP_035423.2	RNAP_II_RPB11	14..105	CDD:132902	71/90 (79%)