Protein Alignment Rpb11 and rpac-19

DIOPT Version :9

• Sequence 1: NP_609836.1
• Gene: Rpb11 / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: NP_499132.1
• Gene: rpac-19 / 176362
• WormBaseID: WBGene00010230
• Length: 144
• Species: Caenorhabditis elegans
• Alignment Length: 102
• Identity: 32/102 - (31%)
• Similarity: 53/102 - (51%)
• Gaps: 6/102 - (5%)

  Fly    17 KKIIKELDTK-----VTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPHPLEHKFVIRIQ 76
            ||.::.||.|     .:|..:. :.:||||:||.|::.|.:...|.|.||.||||||.|.:.|:|
 Worm    43 KKKMEILDPKSFEQDPSNLTLI-MYEEDHTIGNSIKHILSRMDEVEFCGYNVPHPLEDKILFRVQ 106

  Fly    77 TTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKK 113
            |....:..|....|...:....|....:|:::.::.:
 Worm   107 TKDGINALEVLAKAFESVEQIFSTIRGKFEESYEQSQ 143

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpb11	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	31/92 (34%)
rpac-19	NP_499132.1	RNAP_I_III_AC19	52..135	CDD:132907	27/83 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1761
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1398114at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820