Protein Alignment Polr2J and Rpb11

DIOPT Version :10

• Sequence 1: NP_609836.1
• Gene: Polr2J / 35043
• FlyBaseID: FBgn0032634
• Length: 117
• Species: Drosophila melanogaster
• Sequence 2: XP_319985.2
• Gene: Rpb11 / 1280168
• VectorBaseID: AGAMI1_005757
• Length: 117
• Species: Anopheles gambiae
• Alignment Length: 117
• Identity: 105/117 - (89%)
• Similarity: 114/117 - (97%)
• Gaps: 0/117 - (0%)

  Fly     1 MNAPPTFESFLLYEGEKKIIKELDTKVTNAAIFTINKEDHTLGNMIRNQLLKDPNVLFAGYKVPH 65
            ||||||||||||||||||||||||.||.||||||:|||||||||||||||||||||||||||:||
Mosquito     1 MNAPPTFESFLLYEGEKKIIKELDMKVPNAAIFTVNKEDHTLGNMIRNQLLKDPNVLFAGYKLPH 65

  Fly    66 PLEHKFVIRIQTTADYSPQEAFMNAITDLLAELSLFEERFKDAIKEKKEGGD 117
            |||||||:|||||::|||.|||||||||||:|||||||||::|:||||||||
Mosquito    66 PLEHKFVLRIQTTSEYSPHEAFMNAITDLLSELSLFEERFREAMKEKKEGGD 117

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Polr2J	NP_609836.1	RNAP_II_RPB11	14..105	CDD:132902	81/90 (90%)
Rpb11	XP_319985.2	RNAP_II_RPB11	14..105	CDD:132902	81/90 (90%)