Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011508493.1 | Gene: | CEP350 / 9857 | HGNCID: | 24238 | Length: | 3189 | Species: | Homo sapiens |
Alignment Length: | 2157 | Identity: | 417/2157 - (19%) |
---|---|---|---|
Similarity: | 789/2157 - (36%) | Gaps: | 627/2157 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 GTSAPFPSPVTADPEPGATASKLPGPIRSNIPTPATSGTGIPQPSKMKAPSSFGSTGSVSKIGRP 74
Fly 75 CCNHTTPKSG--PPPREATSMSRESDDNLSSINSAYTDNSSAVLTANTEQFIIGQRVWLGGTRPG 137
Fly 138 QIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQCEPKRGIFSRL----------TRLTTY 192
Fly 193 PLAG------------AQTPTSPLAKSSPDRSR-TVSPTASIRS-SMLRSPGIGGKNGMAVGDRV 243
Fly 244 IVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAKVSL 308
Fly 309 SPSSKKTRLSRTGSRESLTS-IGTMNSIATTATSRMRMNAQQRKSSTPVKPILATPKSQFSMQDL 372
Fly 373 LREKQQHVE------KLMVERDL-----DREDAQNQALQL-----------QKNINEVIIFTDTM 415
Fly 416 YAPLPYADRSRPYRPSKKSRVKVPQQQHIWVPTTLSSSITTSTS---------TRPTIAAATAAA 471
Fly 472 AAAAACNRQPLQQQQQPHLHQKQQQAKPKKVWFCDKKKLFPLKARIVELESALDNERKKTEELQC 536
Fly 537 SIDEAQFCGDELNAQSQVYKEKIHDLESKITKLVSATPSLQSILPPDLPSDDGALQEEIAKLQEK 601
Fly 602 MTIQQKEVESRIAEQLE--EEQRLRENVKYLNEQIATLQSELVSKDEALEKFSLSECGIENL-RR 663
Fly 664 ELELLKEEN------EKQAQEAQAEFTRKLAEKSVEVLRLSSELQNLKATSDSLESERVNKTDEC 722
Fly 723 EILQTEVRMRDEQIRELNQ------------QLDEVTTQLNVQKADSSALDDMLRLQKEGTEEKS 775
Fly 776 TLLEKTEKELVQSKEQAAKTLNDKEQ-----------------LEKQISDLKQLAEQEKLVREMT 823
Fly 824 ENAINQIQLEKESIEQQLALKQNELEDF--QKKQSESEVHLQEIKAQNT-QKDFEL-------VE 878
Fly 879 SGES------LKKLQQQLEQKTLG------------------------HEKLQAAL-EELKKEKE 912
Fly 913 TIIKEKEQELQQLQSKSAES---ESALKVVQVQLEQLQQQAAASGEE---GSKTVAK-LHDEISQ 970
Fly 971 LKSQAEETQSELK-----STQSNL--EAKSKQLE------------------------AANGSLE 1004
Fly 1005 EEAKKSGHLLEQ----ITKLKSEVGETQAALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAE 1065
Fly 1066 ASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKFSDE-IATGHKELTSKADAWSQEMLQKEKE 1129
Fly 1130 LQELRQQLQDSQDSQTKLKAEGERKEKSFEESIKNLQEEVTKAKTENLELSTGTQTTIKDLQERL 1194
Fly 1195 E--ITNAELQHKEKMASEDAQKIADLKTLVEAIQVANANI---------SATNAELSTVLEVLQA 1248
Fly 1249 EKSETNHIFELFEMEADMNSERLIEKVTGIKEELKE---THLQLDERQKKFEE-------LEEKL 1303
Fly 1304 KQAQQSE----QKLQQESQTSKEKLTEIQ-QSLQELQDSVKQKE-ELVQNLEEKVRESSSIIEAQ 1362
Fly 1363 NTKLNESNVQLENKTSCLKE---TQDQLLESQKKE--KQLQEEAAKLSGELQQVQEANGDIKD-- 1420
Fly 1421 -----------SLVKVEELVKVLEEKLQAATSQLDAQQATNKELQELLVKSQENE---------- 1464
Fly 1465 ------------------------GNLQ-------GE-SLA----VTEKLQQLEQANGELKEAL- 1492
Fly 1493 ---CQKENGL---------------------------------------KELQGKLDESNTVLE- 1514
Fly 1515 SQKKSHNEIQDKLEQAQQKERTLQEETSKLAEQLSQLKQANEELQKSL-------QQKQLL---L 1569
Fly 1570 EK----------GNEFDTQLAEYQKVIDEMDD---AASVK--SALLEQLQNRVAELETALRQAND 1619
Fly 1620 AQKTAYLETKELRRQLESL-----------------ELEKSREVLSLKAQMNGASSRSGKGDEVE 1667
Fly 1668 -------SLDIETSLAKIN--FLNSIIADMQQKNDALKAKVQTLETLPMDFTKPHA--FDALTKR 1721
Fly 1722 KPAPRLF-CDICDEFDQHDTEDCPIQGSEDQDYSTPSSE--SNNNEKERKLP---APRKY----C 1776
Fly 1777 DSCEVFGHDTSE 1788 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | 23/109 (21%) |
CAP_GLY | 125..189 | CDD:396049 | 15/73 (21%) | ||
CAP_GLY | 239..306 | CDD:396049 | 6/66 (9%) | ||
SMC_prok_B | <546..912 | CDD:274008 | 92/444 (21%) | ||
Smc | 734..1591 | CDD:224117 | 206/1124 (18%) | ||
SHE3 | 1502..1702 | CDD:293683 | 55/251 (22%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | 3/20 (15%) | ||
CEP350 | XP_011508493.1 | CAP_GLY | 2572..2635 | CDD:279625 | 12/62 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5244 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D463666at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |