Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009300267.1 | Gene: | clip1a / 797680 | ZFINID: | ZDB-GENE-060526-282 | Length: | 1569 | Species: | Danio rerio |
Alignment Length: | 1870 | Identity: | 497/1870 - (26%) |
---|---|---|---|
Similarity: | 847/1870 - (45%) | Gaps: | 431/1870 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 QPSKMKAPSSFGSTGSVSKIGRPCCNHTTPKSGPPPREATSMSRESDDNLSSINSAYTDNSSAVL 116
Fly 117 TANTEQFIIGQRVWLGGTRPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQCEPKRG 181
Fly 182 IFSRLTRL----------TTYPLAGAQTPTSPLAKSSPDRSRTVSPT--ASIRSSMLRSPGIG-- 232
Fly 233 ----------GKNGMAVGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDD 287
Fly 288 IRYFECKPKYGVFVPIAKV------SLSPSSKKTRLSRTGSRESLT-----------SIGTMNSI 335
Fly 336 ATTATSRMRMNAQQRKSSTPV-KPILATPKSQFSMQDLLREKQQHVEKLMVERDLDREDAQNQAL 399
Fly 400 QLQKNINEVIIFTDTMYAPLPYADRSRPYRPSKKSRVKVPQQQHIWVPTTLSSSITTSTSTRPTI 464
Fly 465 AAATAAAAAAAACNRQPLQQQQQPHLHQKQQQAKPKKVWFCDKKKLFPLKARIVELESALDNERK 529
Fly 530 KTEELQCSIDEAQFCGDELNAQSQVYKEKIHDLESKITKLVSATPSLQSILPPDLPSDDGALQEE 594
Fly 595 IAKLQEKMTIQQKEVESRIAEQLEEEQRLRENVKYLNEQIATLQSELVSKDEALEKFSLSECGIE 659
Fly 660 NLRRELELLKEENEKQAQEAQAEFTRKLAEKSVEVLRLSSELQNLKATSDSLESERVNKTDECEI 724
Fly 725 LQTEVRMRDEQIRELNQQLDEVTTQLNVQKADSSALDDMLRLQKEGTEEKSTLLEKTEKELVQSK 789
Fly 790 EQAAKTLNDK------EQLEKQISDLKQLAEQEKLVREMTENAINQIQLEKESIEQQLALKQNEL 848
Fly 849 EDFQKKQSESEVHLQE-------IKAQNTQKDFELVESGESLKKLQQQLEQKTLGHEKLQAALEE 906
Fly 907 LKKEKETIIKEKEQELQQLQSKSAESESALKVVQVQLEQLQQQAAASGEEGSKTVAKLHDEISQL 971
Fly 972 KSQAEETQSELKSTQSNLEAKSKQLEAANGSLEEEAKKSGHLLEQITKLKSEVGETQAALSSCHT 1036
Fly 1037 DVESKTKQLEAANAALEKVNKEYAESRAEASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKF 1101
Fly 1102 SDEIATGHKELTSKADAWSQEMLQKEKELQELRQQLQDSQD---------SQTKLKAEGERKE-- 1155
Fly 1156 KSFEESIKNLQEEVTKAKTENLELSTGTQTTIKDLQ---ERLEITNAELQHKEKMASEDAQKIAD 1217
Fly 1218 LKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELFEMEADMNSERLIEKVTGIKEEL 1282
Fly 1283 KETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQN 1347
Fly 1348 LEEKVRESSSIIEAQNTKLNESNVQLENKTSCLKETQDQLLESQKKEKQLQEEAAKLSGELQQ-V 1411
Fly 1412 QEANGDIKDSLVKVEELVKVLEEKLQAATSQLDAQQATNKELQELLVKSQENEGNLQGESLAVTE 1476
Fly 1477 KLQQLEQANGELKEAL----CQKENGLKELQGKLDESNTVLESQKKSHNEIQDKLEQAQQKERTL 1537
Fly 1538 QEETSKLAEQLSQLKQANEELQKSLQ-QKQLLLEKGNEFDTQLAEYQKVIDEMDDAASVKSALLE 1601
Fly 1602 QLQNRVAELETALRQANDAQKTAYLETKELRRQLESLELEKSREVLSLKAQMNG---------AS 1657
Fly 1658 SRSGKGDEVESLD----IETSLA-----------------------------KINFLNSIIADMQ 1689
Fly 1690 QKNDALKAKVQTLE--------TLPMDFTKPHAFDALTKRKPAPRLFCDICDEFDQHDTEDCPIQ 1746
Fly 1747 GS-EDQDYSTPSSESNNNEKERKLPAPRKYCDSCEVFGHDTSECADDETY 1795 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | 20/65 (31%) |
CAP_GLY | 125..189 | CDD:396049 | 40/63 (63%) | ||
CAP_GLY | 239..306 | CDD:396049 | 40/66 (61%) | ||
SMC_prok_B | <546..912 | CDD:274008 | 81/378 (21%) | ||
Smc | 734..1591 | CDD:224117 | 211/889 (24%) | ||
SHE3 | 1502..1702 | CDD:293683 | 60/242 (25%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | 11/15 (73%) | ||
clip1a | XP_009300267.1 | CAP_GLY | 55..118 | CDD:279625 | 40/62 (65%) |
CAP_GLY | 193..256 | CDD:279625 | 40/65 (62%) | ||
Smc | <333..1004 | CDD:224117 | 198/888 (22%) | ||
SCP-1 | 709..1402 | CDD:114219 | 195/832 (23%) | ||
COG7 | 720..>871 | CDD:287200 | 49/195 (25%) | ||
SPEC | 940..1119 | CDD:295325 | 38/192 (20%) | ||
GluZincin | 1227..>1365 | CDD:301352 | 41/159 (26%) | ||
CLIP1_ZNF | 1507..1524 | CDD:293247 | 14/16 (88%) | ||
CLIP1_ZNF | 1547..1563 | CDD:293247 | 11/15 (73%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574807 | |
Domainoid | 1 | 1.000 | 253 | 1.000 | Domainoid score | I2025 |
eggNOG | 1 | 0.900 | - | - | E1_COG5244 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 518 | 1.000 | Inparanoid score | I1239 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1110101at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002895 | |
OrthoInspector | 1 | 1.000 | - | - | otm24265 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104816 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1398 |
SonicParanoid | 1 | 1.000 | - | - | X2251 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.690 |