Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006529963.1 | Gene: | Cep350 / 74081 | MGIID: | 1921331 | Length: | 3140 | Species: | Mus musculus |
Alignment Length: | 2115 | Identity: | 413/2115 - (19%) |
---|---|---|---|
Similarity: | 758/2115 - (35%) | Gaps: | 564/2115 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 GATASKLPGPIRSNIPTPATSGTGIPQPSKMKAPSSFGSTGSVSKIGRPCCNHTTPKSGPPPREA 90
Fly 91 TSMSRESDDNLSSINSAYTDNSSAVLTANTEQFIIG-QRVWLGGTRPGQIAFIGDT--HFAAGEW 152
Fly 153 AGVVLDEPNGKNDGCVSGKRYFQCEPKRGIFSRLTRLTTYPLAGAQTPTSPLAKSSPDRSRTVSP 217
Fly 218 TASIRSSMLRSPGIGGKNGMAVGDRVIV-------------SSGFGSRPGILRYLGETQFAPGNW 269
Fly 270 CGVELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAKVSLSPSS-----KKTRLSRTGSRESLTSI 329
Fly 330 GTMNSIATTAT--SRMRMNAQQRKSSTPVKPILATPKSQFSMQDLLREKQQ-HVEKLMVERDLD- 390
Fly 391 -REDAQNQALQLQKNINEVIIFTDTMYAPLPYADRSRPYRPSKKSRVKVPQQQHIWVPTTLSSS- 453
Fly 454 -ITTSTS---------TRPTIAAATAAAAAAAACNRQPLQQQQQPHLHQKQQQAKPKKVWFCDKK 508
Fly 509 KLFPLKARIVELESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYKEKIHDLESKITKLVSAT 573
Fly 574 PSLQSILPPDLPSDDGALQEEIAKLQEKMTIQQKEVESRIAEQLE--EEQRLR-ENVKYLNEQ-- 633
Fly 634 ---IATLQS----ELVSKDEALEKFSLSECGIENLRR-ELELLKEENEKQAQEAQAEFTRKLAEK 690
Fly 691 SVEVLRLSSELQNLKATSDSLESERVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQLNVQKA 755
Fly 756 DSSALDDMLRLQKEGTEEKSTLLEKTEKELVQSKEQAAKTLNDKEQ-----------------LE 803
Fly 804 KQISDLKQLAEQEKLVREMTENAINQIQLEKESIEQQLALKQNELEDFQKKQ------------- 855
Fly 856 ----------------------SESEVHLQEIKAQNTQKD------------------------- 873
Fly 874 -------FELV---ESGESLKKLQQQLEQKTLGHEKL----------QAALEELKK------EKE 912
Fly 913 TI---IKEKEQELQQLQSKSAESESALKVVQVQLEQ----------------LQQQAAASGEEGS 958
Fly 959 KTVAKLHDEI---SQLKSQAEETQSELKSTQSNLEAKSKQLEAANGSLEEEAKKSGHLLEQITKL 1020
Fly 1021 KSEVGETQAALSSCHTDVESKTKQLEAANAALEKVNKEYAESRAEASDLQDKVKEITDTLHAELQ 1085
Fly 1086 AERSSSSALHTKLSKFSDE-IATGHKELTSKADAWSQEMLQKEKELQELRQQLQDSQDSQTKLKA 1149
Fly 1150 EGERKEKSFEESIK--NLQEEVT----KAKTENLELSTGTQTTIKDLQERLEITNAELQHKEKMA 1208
Fly 1209 SEDAQKIADLKTLVEAIQVANANISATNAE------------LSTVLEVLQAEKSETNHIFELFE 1261
Fly 1262 MEADMNSERL-IEKVTGIKEELKETH-------------LQLDERQKKF--EELEEKLKQAQQSE 1310
Fly 1311 QKLQQESQTSKEKLTEIQQSLQELQDSVKQKEELVQNLEEKVRES-SSIIEAQNTKLNESNVQLE 1374
Fly 1375 NKTSCLKE--TQDQLLE---------SQKKEKQLQEEAAKLSGELQQVQEANGDIKDSLVKVEEL 1428
Fly 1429 VKVLEEKLQAATSQLDAQQATNKELQELLVKSQENE--GNLQGES----LAVTEKL--------- 1478
Fly 1479 -------------------------QQLEQANGE-------LKEALCQKENGLKELQGKLDE--- 1508
Fly 1509 --SNTVLESQKKSHNEIQDKLEQAQQKE-RTLQEETSKLAE-----QLSQLKQANEELQKSLQQK 1565
Fly 1566 QLLLEKGNEFDTQLAEYQKVIDEMDDAASVKSALLEQLQNRV-----AELETALRQANDAQKTAY 1625
Fly 1626 LETKELRRQLESLE-------LEK---------SREVLSLKAQMNGASSRSGKG-DEVESLDIET 1673
Fly 1674 -SLAKINFLNSIIADMQQKNDALKAKVQTLETLPMDFTK------PHAFDALTKRKPAPRLFCDI 1731
Fly 1732 CDEFDQHDTED-CP--------IQGSE-------------------------DQDYSTPSSE--S 1760
Fly 1761 NNNEKERKLP-------APRKYCDSCEVFGHDTSE 1788 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | 25/91 (27%) |
CAP_GLY | 125..189 | CDD:396049 | 12/66 (18%) | ||
CAP_GLY | 239..306 | CDD:396049 | 15/79 (19%) | ||
SMC_prok_B | <546..912 | CDD:274008 | 89/481 (19%) | ||
Smc | 734..1591 | CDD:224117 | 201/1086 (19%) | ||
SHE3 | 1502..1702 | CDD:293683 | 46/233 (20%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | 4/16 (25%) | ||
Cep350 | XP_006529963.1 | PTZ00121 | <1336..>1814 | CDD:173412 | 115/568 (20%) |
PTZ00108 | <1890..2151 | CDD:240271 | 57/300 (19%) | ||
COG5022 | <2095..2375 | CDD:227355 | 64/296 (22%) | ||
NIP100 | 2531..>2808 | CDD:227569 | 49/291 (17%) | ||
CAP_GLY | 2531..2595 | CDD:366568 | 4/63 (6%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5244 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |