Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001376220.1 | Gene: | CLIP1 / 6249 | HGNCID: | 10461 | Length: | 2148 | Species: | Homo sapiens |
Alignment Length: | 2285 | Identity: | 575/2285 - (25%) |
---|---|---|---|
Similarity: | 937/2285 - (41%) | Gaps: | 682/2285 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 QPSKMKAPSSFGSTGSVSKIGRPCCNHTTPKSGPPPREATSMSRESDDNLSSINSAYTDNSSAVL 116
Fly 117 TANTEQFIIGQRVWLGGTRPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQCEPKRG 181
Fly 182 IFSRLTRLT-------------TYPLAGAQTP----TSPLAKSSPDRSRTV-------------- 215
Fly 216 -------SPTASIRSSMLRSPGI--GGKNGMAVGDRVIVSSGFGSRPGILRYLGETQFAPGNWCG 271
Fly 272 VELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAKV------SLSPSSKKT----RLSRTGSRE-- 324
Fly 325 ---SLTSIGTMNSIATTATSR-MRMNAQQRKSSTPVKPILATPKSQFSMQDLLREKQQHVEKLMV 385
Fly 386 ERDLDREDAQNQALQLQKNINEVIIFTDTMYAPLPYADRSRPYRPSKKSRVKVPQQQHIWVPTTL 450
Fly 451 SSSITTSTSTRPTIAAATAAAAAAAACNRQPLQQQQQPHLHQKQQQAKPKKVWFCDKKKLFPLKA 515
Fly 516 RIVELESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYKEKIHDLESKITKLVSATPSLQSIL 580
Fly 581 PPDLPSDDG----ALQEEIAKLQEKMTI----------------------QQKEVES--RIAEQL 617
Fly 618 -EEEQRLRENVKYLNEQ----IA----TLQSELVSKDEALEKFSLS---------------ECGI 658
Fly 659 ENLR----RELELL--KEENEKQAQEAQAEFTR-------KLAEKSVEVLRL---SSELQNLKAT 707
Fly 708 SDSLESERVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQLNVQKADSSALDDMLRLQKEGTE 772
Fly 773 EKSTLLEKTEKELVQSKEQAAKTLNDKE-----QLEKQISDLKQLAEQEKLVREMTENAINQIQL 832
Fly 833 EKESIEQQLALKQNELEDFQKKQSESEVHLQEI--KAQNTQKDFELVESG-----ESLKKLQQQL 890
Fly 891 EQKTLGHEKLQAALEELKKEKETIIKE-----------------KEQELQQLQSKSAES------ 932
Fly 933 -ESALKVVQVQLEQLQQQAAASGEEGSKTVAK-----------LHDEISQLKSQAEETQSELKST 985
Fly 986 QSN-LEAKSKQLEAANGSLEEEAKKSGHLLEQITKLKSEVGETQA---ALSSCHTDVESKTKQLE 1046
Fly 1047 AANAALEKVNKEYAESRAEASDLQDKVKEITDTLHAELQAER----SSSSALHTKLSKFSDEIAT 1107
Fly 1108 GHK-----ELTSKADAWSQEMLQKE-----KEL-----------------QELRQQLQDSQDSQT 1145
Fly 1146 KLKAEGERKEK------------------------------SFEESIKNLQ------EEVTKAKT 1174
Fly 1175 ENLE-------------------------LSTGTQTTIKDLQERLEIT-NAELQHKEKMASEDAQ 1213
Fly 1214 KIADLKTLVEAIQVA---NANISATNAELSTVLEVLQAEKSETN-------HIFE---------L 1259
Fly 1260 FEMEADMNSERLI-EKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEK 1323
Fly 1324 ----------LTEIQQSLQELQDSVKQKEE---------------------LVQNLEEKVRESSS 1357
Fly 1358 II-----------EAQNTKLNESNVQLENKTSCL---KETQDQLLESQKKEK--------QLQEE 1400
Fly 1401 AAKLSGELQQVQEA------------------NGDIKDSLVKVE--------------------- 1426
Fly 1427 --------ELVKVLEEK--LQAATSQLDAQQATNK-----------ELQEL-------------- 1456
Fly 1457 ---------------------------------------------------------------LV 1458
Fly 1459 KSQENEGNLQGESLAVTEKLQQLE------------------------------------QANGE 1487
Fly 1488 LKEAL-CQKENGLKELQGKLDESNTVLESQKKSHNEIQDKLE-------QAQQKERTLQEETSKL 1544
Fly 1545 AEQLSQLK------QANEELQKSLQQKQLLLEKGNE------FDTQLAEYQKVIDEMDDAASVKS 1597
Fly 1598 ALLEQLQNRVAELETALRQANDAQKTAYLETKELRRQLESLELEKSREVLSLKAQMNGASSRSGK 1662
Fly 1663 GDEVESLDIETSLAKINFLNSIIADMQQKNDALKAKVQTLETLPM-----DFTKPHAFDALTKRK 1722
Fly 1723 PAPRLFCDICDEFDQHDTEDCPIQG--SEDQDYSTPSSESNNNEKERKLPAPRKYCDSCEVFGHD 1785
Fly 1786 TSECADDETY 1795 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | 17/65 (26%) |
CAP_GLY | 125..189 | CDD:396049 | 40/63 (63%) | ||
CAP_GLY | 239..306 | CDD:396049 | 40/66 (61%) | ||
SMC_prok_B | <546..912 | CDD:274008 | 102/445 (23%) | ||
Smc | 734..1591 | CDD:224117 | 268/1266 (21%) | ||
SHE3 | 1502..1702 | CDD:293683 | 69/218 (32%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | 8/15 (53%) | ||
CLIP1 | NP_001376220.1 | CAP_GLY | 60..124 | CDD:396049 | 40/63 (63%) |
CAP_GLY | 214..278 | CDD:396049 | 40/66 (61%) | ||
SbcC | <335..835 | CDD:223496 | 129/594 (22%) | ||
Smc | 612..1442 | CDD:224117 | 190/848 (22%) | ||
Smc | 1176..1977 | CDD:224117 | 175/815 (21%) | ||
CLIP1_ZNF | 2126..2142 | CDD:406934 | 8/15 (53%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165141910 | |
Domainoid | 1 | 1.000 | 210 | 1.000 | Domainoid score | I2817 |
eggNOG | 1 | 0.900 | - | - | E1_COG5244 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 406 | 1.000 | Inparanoid score | I1898 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1110101at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002895 | |
OrthoInspector | 1 | 1.000 | - | - | otm40362 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104816 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1398 |
SonicParanoid | 1 | 1.000 | - | - | X2251 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.730 |