| Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_001071128.2 | Gene: | Mmrn1 / 500152 | RGDID: | 1587248 | Length: | 1210 | Species: | Rattus norvegicus |
| Alignment Length: | 1206 | Identity: | 236/1206 - (19%) |
|---|---|---|---|
| Similarity: | 418/1206 - (34%) | Gaps: | 310/1206 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 207 SSPDRSRTVSPTASIRSSMLRSPGIGGKNGMAVGDRVIVSSGFGSRPGILRYLGETQFAPGNWCG 271
Fly 272 VELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAKVSLSPSSKKTRLSRTGSRESLTSIGTMNSIA 336
Fly 337 TTATSRMRMNAQQRKSSTPVKP-------ILATPKSQFSMQDLLREKQQHVEKLMVERDLDREDA 394
Fly 395 QNQALQLQKNINEVIIFTDTMYAPLPYADRSRPYRPS-KKSRVKVPQQQHIW---VPTTLSSSIT 455
Fly 456 TSTSTRPTIAAATAAAAAAAACNRQPLQQQQQPHLHQKQQQAKPKKVWFCDKKKLFPLKARIVEL 520
Fly 521 ESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYKEKIHDLESKITKLVSATPSLQSILPPDLP 585
Fly 586 SDDGALQEEIAKLQEKMTIQQKEVESRIAEQLEEEQRLRENVKYLNEQIATLQSELVSKDEALEK 650
Fly 651 FSLSECGIENLRREL-ELLKEENEKQAQEAQAEFTRKLAEKSVEVLRLSSELQNLKATSDSLESE 714
Fly 715 RVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQLNVQKADSSALDDMLRLQKEGTEEKSTL-- 777
Fly 778 --------LEKTEKELV--QSKEQAA----------------KTLNDKEQLEKQISDLKQLAEQE 816
Fly 817 KLVREMTENAINQIQLEKESIEQQLALKQNELEDFQKKQSESEVHLQEIKAQN------TQKDFE 875
Fly 876 LVESGESLKKLQQ----QLEQKTLGHEKLQAALEELKKEKETIIKEKEQELQQLQSKSAESESAL 936
Fly 937 KVVQVQLEQ---LQQQAAASGEEGSKTVAKLHDEISQLKSQAEETQSELKSTQSNLEAKSKQLEA 998
Fly 999 ANGSLEEEAKKSGHLLEQITKLKSEVGETQAALSSCHTDVESKTKQLEAANAALEKVNKEYA-ES 1062
Fly 1063 RAEASDLQDKVKEITDTLHA------ELQAERSSSSALHTKLSKFSD--EIATGHKELTS--KAD 1117
Fly 1118 AWSQEMLQKEKEL-QELRQQLQDSQDSQTKLKAE---GERKEKSFEESIKNLQEEVTKAK----- 1173
Fly 1174 --TENLELSTGTQTTIKDLQERLEITNAELQHKEKMASEDAQKIADLKTLVEAIQVANANISAT- 1235
Fly 1236 ---NAEL-----STVLEVLQAEKSETNHIFELFEMEADMNSERLIEKVTGIKEELKE---THLQL 1289
Fly 1290 DERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLT 1325 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | |
| CAP_GLY | 125..189 | CDD:396049 | |||
| CAP_GLY | 239..306 | CDD:396049 | 9/66 (14%) | ||
| SMC_prok_B | <546..912 | CDD:274008 | 79/404 (20%) | ||
| Smc | 734..1591 | CDD:224117 | 145/667 (22%) | ||
| SHE3 | 1502..1702 | CDD:293683 | |||
| CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
| Mmrn1 | XP_001071128.2 | EMI | 195..262 | CDD:284877 | 12/69 (17%) |
| Mplasa_alph_rch | <311..851 | CDD:275316 | 130/609 (21%) | ||
| EGF_CA | 1027..1059 | CDD:238011 | |||
| C1q | 1076..1210 | CDD:305035 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||