Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013964.1 | Gene: | Clip4 / 298801 | RGDID: | 1311049 | Length: | 599 | Species: | Rattus norvegicus |
Alignment Length: | 432 | Identity: | 108/432 - (25%) |
---|---|---|---|
Similarity: | 166/432 - (38%) | Gaps: | 158/432 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 PSPVTADP--------EPGATASKLPGPIRSNIPTPATSGTGIPQPSKMKAPSSFGSTGSVSKIG 72
Fly 73 RPCCNHTTPKSGPPPREATSMSRESDDNLSSINSAYTDNSSAVLTANTEQFIIGQRVWLGGTRPG 137
Fly 138 QIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQCEPKRGIFSRLTRLT------------ 190
Fly 191 ----------------------------------------------------------------- 190
Fly 191 --TYPLAGAQTPTSPLAKSSPDRSRTVSPTASI---RSSMLRSPGIGGKN------GMAVGDRVI 244
Fly 245 VSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAKVSLS 309
Fly 310 PSSKKTRLSRTGSRESLTSIGTMNSIATTATSRM----RMNA 347 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | 17/109 (16%) |
CAP_GLY | 125..189 | CDD:396049 | 32/63 (51%) | ||
CAP_GLY | 239..306 | CDD:396049 | 32/66 (48%) | ||
SMC_prok_B | <546..912 | CDD:274008 | |||
Smc | 734..1591 | CDD:224117 | |||
SHE3 | 1502..1702 | CDD:293683 | |||
CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
Clip4 | NP_001013964.1 | ANK 1 | 65..101 | ||
ANK | 98..252 | CDD:238125 | 6/28 (21%) | ||
ANK repeat | 109..144 | CDD:293786 | |||
Ank_2 | 111..217 | CDD:289560 | |||
ANK 2 | 149..180 | ||||
ANK repeat | 153..184 | CDD:293786 | |||
ANK repeat | 186..217 | CDD:293786 | |||
ANK 3 | 186..215 | ||||
CAP_GLY | 286..349 | CDD:279625 | 32/62 (52%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 387..482 | 13/94 (14%) | |||
CAP_GLY | 488..551 | CDD:279625 | 32/65 (49%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 565..599 | 8/32 (25%) | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D463666at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |