Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001255521.1 | Gene: | dnc-1 / 177987 | WormBaseID: | WBGene00001017 | Length: | 1351 | Species: | Caenorhabditis elegans |
Alignment Length: | 1481 | Identity: | 317/1481 - (21%) |
---|---|---|---|
Similarity: | 566/1481 - (38%) | Gaps: | 445/1481 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 239 VGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVFVPI 303
Fly 304 AKVSLSPSSKKTRL-------------------------------SRTGSRESLTSIGTMNSIAT 337
Fly 338 TATSRMRMNAQQRKSSTPVK------PILATPKSQFSMQDLLRE----KQQHVEKLMVERDLDR- 391
Fly 392 ------EDAQNQALQLQKNINEVIIFTDTMYAPLPYADRSRPYR---PSKKSRVKVPQQQHIWVP 447
Fly 448 TTLSSSITTSTSTRPTIAAATAAAAAAAACNRQPL--QQQQQPHLHQKQQQAKPKKVWFCDKKKL 510
Fly 511 FPL---------KARIVELESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYKEKIHDLESKI 566
Fly 567 TKLVSATPSLQSILPPDLPSDDGALQEEI-AKLQEKMTIQQKEV-ESRIA-EQLEEEQRLRENVK 628
Fly 629 YLNEQIATLQSELVSKDEALEK--------FSLSECGIENLRRELELLKEENEKQAQEAQAEFTR 685
Fly 686 KLAEKSVEVLRLSSELQNLKATSDSLESERVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQL 750
Fly 751 NVQKADSSALDDMLRLQKEGTEEKSTLLEKTEKELVQSKEQAAKTLNDKEQLEKQISDLKQLAEQ 815
Fly 816 EKLVREMTENAINQ----IQLEK--------ESIEQQLA-LKQNELEDFQKKQSESEVHLQEIKA 867
Fly 868 QNTQKDFELVESGESLKKLQQQLEQKTLGHEKLQAALEELKKEKETIIKEKEQELQQLQSKSAES 932
Fly 933 ESALKVVQVQL-------EQLQQQAAASGEEGSKTVAK-----LHDEISQLKSQAEETQSELKST 985
Fly 986 QSNLEAKSKQL---------EAANGSLEEEAKKSGHLLEQ-----------------ITKLKSEV 1024
Fly 1025 GETQAALSSCHTDVESKTKQLEAANAALEKVNKEYAE----SRAEASDLQDK------------- 1072
Fly 1073 -------------VKEITDTLHAELQ-------------AERSSSSALHTKLSKFSDEIAT---- 1107
Fly 1108 ---GHKELTSKADAWSQEMLQKEKELQE--LRQQLQDSQDSQTKLKAE----------GERKEKS 1157
Fly 1158 FEESIKNLQEEVTK--AKTENLELSTGT----QTTIKDLQERLEITNAELQ-------------- 1202
Fly 1203 -------HKEKMASEDAQKIADLKTLVEAIQVANANISATNAELSTVLEVLQAEKSETNHIFELF 1260
Fly 1261 EMEADMNSERLIEKVTGIKEELKETHLQLDERQK----KFEELEEKLKQAQQSEQKLQQESQTSK 1321
Fly 1322 EKLTEIQQSLQELQD---SVKQ------KEELVQNLEE-KVRESSSIIEAQNTKLNESN------ 1370
Fly 1371 VQLENKTSCLKETQDQLLESQKKEKQLQEEAAKLSGELQQVQE---------ANGDIK-DSLVKV 1425
Fly 1426 EELVKVL----EEKLQAATSQLDAQQ--------ATNKELQELLVKSQENE 1464 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | |
CAP_GLY | 125..189 | CDD:396049 | |||
CAP_GLY | 239..306 | CDD:396049 | 33/66 (50%) | ||
SMC_prok_B | <546..912 | CDD:274008 | 83/389 (21%) | ||
Smc | 734..1591 | CDD:224117 | 180/913 (20%) | ||
SHE3 | 1502..1702 | CDD:293683 | |||
CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
dnc-1 | NP_001255521.1 | CAP_GLY | 5..68 | CDD:366568 | 33/66 (50%) |
PHA03247 | <71..306 | CDD:223021 | 51/270 (19%) | ||
Smc | <366..648 | CDD:224117 | 75/346 (22%) | ||
Dynactin | 630..914 | CDD:372121 | 55/296 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 71 | 1.000 | Domainoid score | I6145 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1398 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.030 |