| Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001022682.1 | Gene: | clip-1 / 176307 | WormBaseID: | WBGene00010796 | Length: | 937 | Species: | Caenorhabditis elegans |
| Alignment Length: | 1203 | Identity: | 236/1203 - (19%) |
|---|---|---|---|
| Similarity: | 421/1203 - (34%) | Gaps: | 356/1203 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 241 DRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKPKYGVFVPIAK 305
Fly 306 VSLS--------PSSKKTRLSRTGSRESLTSIGTMNSIATTATSRMRMNAQQRKSSTPVKPILAT 362
Fly 363 PKSQFSMQDLLREKQQHVEKLMVERDLDREDAQNQALQLQKNINEVIIFTDTMYAPLPYADRSRP 427
Fly 428 YRPSKKSRVKVPQQQHIWVPTTLSSSITTSTSTRPTIAAATAAAAAAAACNRQPLQQQQQPHLHQ 492
Fly 493 KQQQAKPKKVWFCDKKKLFPLKARIVELESALDNERKKTEELQCSIDEAQFCGDELNAQSQVYKE 557
Fly 558 KIHDL-ESKITKLVSATPSLQSILPPDLPSDDGALQEEIAKLQEKMTIQQKEVESRIAEQLEEEQ 621
Fly 622 RLRENVKYLNEQIATLQSELVSKDEALEKFSLSECGIENLRRELELLKEENEKQAQEAQAEFTRK 686
Fly 687 LAEKSVEVLRLSSELQNLKATSDSLESERVNKTDECEILQTEVRMRDEQIRELNQQLDEVTTQLN 751
Fly 752 VQKADSSALDDMLRLQKEGTEEKSTLLEKTEKELVQSKEQAAKTLNDKEQLEKQISDLKQLAEQE 816
Fly 817 KLVREMTENAINQIQLEKESIEQQLALKQNELEDFQKKQSESEVHLQEIKAQNT-QKDFELVESG 880
Fly 881 ESLKKLQQQLEQKTLGHEKLQA------ALEELKKEKETI-----IKEKEQELQQLQSK------ 928
Fly 929 -SAESESALKVVQVQLEQLQQQAAASGEEGSKTVAKLHDEISQLKSQAEETQS---ELKSTQSNL 989
Fly 990 EAKSKQLEAA----NGSLEEEAKKSGHLLEQITKLKSEVGETQAALSSCHTDVESKTKQLEAANA 1050
Fly 1051 ALEKVNKEYAES--RAEASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKFSDEIATGHKELT 1113
Fly 1114 SKADAWSQEMLQKEKELQELRQQLQDSQDSQTKLKAEGERKEKSFEESIKNLQEEVTKAKTENLE 1178
Fly 1179 LSTGTQTTIKDLQE----RLEITNAELQHKEKMASEDAQKIADLKTLVEAIQVANANISATNAEL 1239
Fly 1240 STVLEVLQAEKSETNHIFELFEMEADMNSERLIEKVTGIKEELK---ETHLQLDERQKKFEELEE 1301
Fly 1302 KLKQAQQSEQKLQQESQ-------------TSKEKLTEIQQSLQELQDSVKQKEELVQNLEEKVR 1353
Fly 1354 ESSSI-IEAQNTKLNESNVQLENKTSCLKETQD 1385 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | |
| CAP_GLY | 125..189 | CDD:396049 | |||
| CAP_GLY | 239..306 | CDD:396049 | 28/64 (44%) | ||
| SMC_prok_B | <546..912 | CDD:274008 | 86/373 (23%) | ||
| Smc | 734..1591 | CDD:224117 | 136/701 (19%) | ||
| SHE3 | 1502..1702 | CDD:293683 | |||
| CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
| clip-1 | NP_001022682.1 | CAP_GLY | 22..85 | CDD:279625 | 28/64 (44%) |
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR18916 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1398 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 3.130 | |||||