Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001360024.1 | Gene: | npp-21 / 174232 | WormBaseID: | WBGene00019940 | Length: | 1970 | Species: | Caenorhabditis elegans |
Alignment Length: | 1590 | Identity: | 332/1590 - (20%) |
---|---|---|---|
Similarity: | 652/1590 - (41%) | Gaps: | 388/1590 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 481 PLQQQQQP-------HLHQKQQQAKPKKVWFCDKKKLFPLKARIVELESALDNERKKTEELQCSI 538
Fly 539 DEAQFCGDELNAQSQV------YKEKIHDLESKITKL-----------VSATPSLQSILPPDLPS 586
Fly 587 DDGALQEEIAKL-QEKMTIQ------QKEVESRIAEQ----------LEEEQRLRENVKYLNEQI 634
Fly 635 ATLQSELVSKD--------EALEKFSLSECGIENLRRELELLKEENE---KQAQEAQAEFTRKLA 688
Fly 689 EKSVEVLRLSSELQNLKATS------------DSLESERVNKTDECEILQTE------------- 728
Fly 729 -VRMRDEQIRELNQQLDEVT--------TQLNVQKADSS----ALDDMLRLQKEGTEEKSTLLE- 779
Fly 780 -KTEKELVQSKEQAAKTLNDKEQLEKQISDLKQLAEQEKLVR--------------EMTENAINQ 829
Fly 830 IQLEKESIEQQLALKQNELEDFQK-----KQSESEVHLQEIKAQNTQKDFELVESGESLKKLQQQ 889
Fly 890 LEQKTLGHEKLQAALEELK-KEKETIIKEKEQELQQLQ-----SKSAESESALKVVQV------- 941
Fly 942 --QLEQLQQQAAASGEEGSKTVAKLHDE------------ISQLKSQAEETQSELKSTQSNLEAK 992
Fly 993 SKQLEAANGSLEEEAKKSGHLLE-QITKLKSEVGETQAALSSCHTDVESKTKQLEAANAALEK-- 1054
Fly 1055 --VNKEYAESRAEASDLQDKVKEITDTLHAELQAERSSSSALHTKLSKFSDEIATGHKELTSKAD 1117
Fly 1118 AWSQEMLQKEKELQELRQQLQDSQDSQTKLKAEGERKEKSFEESIKNLQEEVTKAKTENL-ELST 1181
Fly 1182 GTQTTIKDLQER----LEITNAELQHKEKMASEDAQKIADLKTLVEAI--QVANANISATN---- 1236
Fly 1237 ----AELSTVLEVLQAE---------KSET---------------NHIFE----LFEMEADMNSE 1269
Fly 1270 RLIEKVTGIKEELKETHLQLDERQKKFEELEEKLKQAQQSEQKLQQESQTSKEKLTEIQQSLQEL 1334
Fly 1335 Q---DSVKQKEELVQNLEEKVRESSSIIEAQNTKLNESNVQLENKTSCLKETQDQLLESQKKEKQ 1396
Fly 1397 LQEE----AAKLSGELQQVQEANGDIKDSLVKVEELVKVLEEKLQAATSQLDAQQATNKE----- 1452
Fly 1453 ---LQELLVKSQENEGNLQGE------------SLAVTEKLQQL----EQANGE----------- 1487
Fly 1488 ---LKEALCQKENGLKELQGKLDE------SNTVLESQKKSHNEIQDKLEQAQQKERTLQEETSK 1543
Fly 1544 LAEQLSQLKQANEELQKSLQQKQLLLEKGNEFDTQLAEYQKVIDEMDDAASVKSALLEQLQNRV- 1607
Fly 1608 ----------------AELETALRQANDAQKTA------YLETKEL--RRQLESLELEKSRE--- 1645
Fly 1646 ------VLSLKAQMNGASSR-SGKGDEVESLD--------IETSLAKINFLNSIIADMQQKNDAL 1695
Fly 1696 -----KAKVQTLETLPMDFTKP---HAFDALTKRKPAPRLFCDIC-------DEFDQ----HDTE 1741
Fly 1742 DCPIQGSEDQDYS-TPSSESNNNEKERKLP 1770 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | |
CAP_GLY | 125..189 | CDD:396049 | |||
CAP_GLY | 239..306 | CDD:396049 | |||
SMC_prok_B | <546..912 | CDD:274008 | 93/470 (20%) | ||
Smc | 734..1591 | CDD:224117 | 216/1015 (21%) | ||
SHE3 | 1502..1702 | CDD:293683 | 57/253 (23%) | ||
CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
npp-21 | NP_001360024.1 | Smc | 25..814 | CDD:224117 | 168/831 (20%) |
Smc | 542..1286 | CDD:224117 | 179/812 (22%) | ||
PTZ00449 | <1424..1746 | CDD:185628 | 14/85 (16%) | ||
Atrophin-1 | 1446..>1586 | CDD:367360 | 11/62 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |