Sequence 1: | NP_001368962.1 | Gene: | CLIP-190 / 35042 | FlyBaseID: | FBgn0020503 | Length: | 1795 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001120145.1 | Gene: | clip3 / 100145183 | XenbaseID: | XB-GENE-5806327 | Length: | 534 | Species: | Xenopus tropicalis |
Alignment Length: | 289 | Identity: | 100/289 - (34%) |
---|---|---|---|
Similarity: | 152/289 - (52%) | Gaps: | 45/289 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 100 NLSSINSAYTDNSSAVLTANTEQFIIGQRVWLGGTRPGQIAFIGDTHFAAGEWAGVVLDEPNGKN 164
Fly 165 DGCVSGKRYFQCEPKRGIFSRLTRLTTYPLAGAQTPTSPLAKSSP-----DRSRTV-----SPTA 219
Fly 220 SIRSSMLRSPGIGGKNGMA--VGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKND 282
Fly 283 GTVDDIRYFECKPKYGVFVPIAKVSLSPSSKKTRLSRTGSRESLTSIGTMNSIATTATSRMRMNA 347
Fly 348 QQRKSSTPVKPILATPK---SQFSMQDLL 373 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CLIP-190 | NP_001368962.1 | PHA03307 | <2..>118 | CDD:223039 | 5/17 (29%) |
CAP_GLY | 125..189 | CDD:396049 | 33/63 (52%) | ||
CAP_GLY | 239..306 | CDD:396049 | 33/66 (50%) | ||
SMC_prok_B | <546..912 | CDD:274008 | |||
Smc | 734..1591 | CDD:224117 | |||
SHE3 | 1502..1702 | CDD:293683 | |||
CLIP1_ZNF | 1773..1789 | CDD:406934 | |||
clip3 | NP_001120145.1 | ANK repeat | 110..147 | CDD:293786 | |
Ank_2 | 112..218 | CDD:372319 | |||
ANK repeat | 149..185 | CDD:293786 | |||
ANK repeat | 187..218 | CDD:293786 | |||
CAP_GLY | 286..350 | CDD:366568 | 33/63 (52%) | ||
CAP_GLY | 405..469 | CDD:366568 | 33/66 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D463666at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1398 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |