DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrch and AT5G07910

DIOPT Version :9

Sequence 1:NP_609834.2 Gene:Lrch / 35041 FlyBaseID:FBgn0032633 Length:1135 Species:Drosophila melanogaster
Sequence 2:NP_196408.2 Gene:AT5G07910 / 830685 AraportID:AT5G07910 Length:262 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LrchNP_609834.2 LRR_8 124..179 CDD:290566
LRR_4 124..161 CDD:289563
leucine-rich repeat 124..146 CDD:275380
leucine-rich repeat 147..167 CDD:275380
leucine-rich repeat 169..192 CDD:275380
leucine-rich repeat 193..215 CDD:275380
leucine-rich repeat 216..237 CDD:275380
leucine-rich repeat 238..260 CDD:275380
leucine-rich repeat 261..279 CDD:275380
CH 676..756 CDD:214479
AT5G07910NP_196408.2 LRR <37..>219 CDD:227223
leucine-rich repeat 47..69 CDD:275380
leucine-rich repeat 70..92 CDD:275380
leucine-rich repeat 93..115 CDD:275380
leucine-rich repeat 116..161 CDD:275380
leucine-rich repeat 162..184 CDD:275380
leucine-rich repeat 185..208 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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